Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030256.1-P | Field mustard | cytosol | 82.49 | 86.39 |
| CDY15842 | Canola | cytosol | 82.49 | 86.39 |
| CDY63411 | Canola | cytosol | 82.49 | 86.14 |
| AT4G39770.1 | Thale cress | cytosol | 77.97 | 79.08 |
| PGSC0003DMT400056161 | Potato | cytosol | 45.2 | 74.77 |
| Solyc04g054930.2.1 | Tomato | cytosol, peroxisome, plastid | 62.71 | 70.03 |
| GSMUA_Achr9P12940_001 | Banana | cytosol, peroxisome, plastid | 52.54 | 66.91 |
| VIT_00s0304g00080.t01 | Wine grape | cytosol, peroxisome | 68.08 | 64.61 |
| Solyc05g051880.2.1 | Tomato | plastid | 50.85 | 64.29 |
| AT5G65140.1 | Thale cress | plastid | 65.25 | 62.43 |
| AT5G10100.1 | Thale cress | plastid | 65.25 | 60.79 |
| PGSC0003DMT400053144 | Potato | plastid | 66.1 | 60.62 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 52.82 | 58.44 |
| GSMUA_Achr10P... | Banana | plastid | 59.32 | 56.76 |
| AT1G35910.1 | Thale cress | plastid | 58.19 | 55.83 |
| GSMUA_Achr6P30350_001 | Banana | plastid | 55.37 | 54.75 |
| GSMUA_AchrUn_... | Banana | peroxisome | 57.34 | 54.42 |
| AT1G78090.1 | Thale cress | plastid | 55.93 | 52.94 |
| GSMUA_Achr10P... | Banana | plastid | 60.17 | 52.72 |
| GSMUA_Achr4P01810_001 | Banana | cytosol, peroxisome, plastid | 55.65 | 52.53 |
| AT4G12430.1 | Thale cress | plastid | 48.59 | 46.74 |
| AT4G22590.1 | Thale cress | plastid | 49.44 | 46.42 |
| AT5G51460.3 | Thale cress | nucleus, plastid | 48.87 | 44.94 |
| OQU89414 | Sorghum | cytosol | 18.93 | 39.65 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | EntrezGene:816753 | ProteinID:AAD23621.1 | ProteinID:AEC07276.1 |
| EMBL:AK176920 | ArrayExpress:AT2G22190 | EnsemblPlantsGene:AT2G22190 | RefSeq:AT2G22190 | TAIR:AT2G22190 | RefSeq:AT2G22190-TAIR-G |
| EnsemblPlants:AT2G22190.1 | TAIR:AT2G22190.1 | EMBL:BT010648 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004805 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0005992 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0016311 | GO:GO:0016787 | InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 |
| RefSeq:NP_179809.2 | PFAM:PF02358 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF1 | UniProt:Q67X99 | SUPFAM:SSF56784 |
| TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | Symbol:TPPE | InterPro:Trehalose_PPase | UniParc:UPI000042BC96 | : |
Description
TPPEProbable trehalose-phosphate phosphatase E [Source:UniProtKB/Swiss-Prot;Acc:Q67X99]
Coordinates
chr2:-:9433616..9436658
Molecular Weight (calculated)
40253.4 Da
IEP (calculated)
8.131
GRAVY (calculated)
-0.438
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRFIEENIT KMLETKAISN SEVLYVGGDD GDTSPTTKVL HDFQINSGGG LIRSWVDSMR ACSPTRPKSF NSQSCWIKEH PSALNMFEEI LHKSEGKQIV
101: MFLDYDGTLS PIVDDPDRAF MSKKMRNTVR KLAKCFPTAI VSGRCREKVS SFVKLTELYY AGSHGMDIKG PEQGSKYKKE NQSLLCQPAT EFLPVINEVY
201: KKLVENTQSI PGAKVENNKF CASVHFRCVE ENKWSDLAHQ VRSVLKNYPK LMLTQGRKVL EIRPIIKWDK GKALEFLLES LGYDNCTDVF PIYIGDDRTD
301: EDAFKILRDK KQGLGILVSK YAKETNASYS LQEPDEVMVF LERLVEWKQS RCGA
101: MFLDYDGTLS PIVDDPDRAF MSKKMRNTVR KLAKCFPTAI VSGRCREKVS SFVKLTELYY AGSHGMDIKG PEQGSKYKKE NQSLLCQPAT EFLPVINEVY
201: KKLVENTQSI PGAKVENNKF CASVHFRCVE ENKWSDLAHQ VRSVLKNYPK LMLTQGRKVL EIRPIIKWDK GKALEFLLES LGYDNCTDVF PIYIGDDRTD
301: EDAFKILRDK KQGLGILVSK YAKETNASYS LQEPDEVMVF LERLVEWKQS RCGA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.