Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14635 | Canola | plastid | 88.24 | 87.53 |
| Bra008344.1-P | Field mustard | plastid | 87.97 | 87.27 |
| CDY26848 | Canola | plastid | 87.97 | 86.81 |
| Bra015631.1-P | Field mustard | plastid | 86.9 | 85.98 |
| CDX87477 | Canola | plastid | 86.9 | 85.98 |
| CDX88416 | Canola | plastid | 86.1 | 85.19 |
| CDY26849 | Canola | mitochondrion | 52.67 | 84.55 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 58.82 | 68.75 |
| KRH62370 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 60.7 | 61.19 |
| KRH18894 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 59.89 | 60.22 |
| AT5G65140.1 | Thale cress | plastid | 59.36 | 60.0 |
| KRH53087 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 60.7 | 59.74 |
| KRH49582 | Soybean | mitochondrion | 45.45 | 59.65 |
| VIT_18s0001g05300.t01 | Wine grape | plastid | 59.63 | 59.47 |
| AT1G35910.1 | Thale cress | plastid | 58.56 | 59.35 |
| Zm00001d052227_P001 | Maize | cytosol | 55.88 | 58.71 |
| KRH30218 | Soybean | plastid | 33.42 | 58.41 |
| Os03t0386500-01 | Rice | cytosol, extracellular, peroxisome | 48.4 | 58.39 |
| KRH16701 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 58.82 | 58.05 |
| GSMUA_Achr2P22170_001 | Banana | cytoskeleton, cytosol, peroxisome | 51.07 | 57.53 |
| Os02t0753000-01 | Rice | cytosol | 56.42 | 57.49 |
| AT4G39770.1 | Thale cress | cytosol | 53.48 | 57.31 |
| Os08t0409100-01 | Rice | peroxisome | 56.42 | 57.03 |
| KXG30780 | Sorghum | cytosol | 56.42 | 56.72 |
| EES13815 | Sorghum | peroxisome | 56.68 | 56.38 |
| Zm00001d032298_P002 | Maize | plastid | 55.88 | 56.18 |
| AT2G22190.1 | Thale cress | cytosol, nucleus, peroxisome | 52.94 | 55.93 |
| TraesCS7D01G182600.1 | Wheat | peroxisome, plastid | 54.01 | 55.65 |
| GSMUA_Achr2P14790_001 | Banana | cytosol | 55.08 | 55.38 |
| HORVU7Hr1G037140.1 | Barley | plastid | 53.48 | 55.25 |
| GSMUA_Achr4P24170_001 | Banana | cytosol | 56.68 | 55.21 |
| TraesCS7A01G180800.1 | Wheat | peroxisome, plastid | 52.94 | 54.85 |
| TraesCS5D01G200800.1 | Wheat | plastid | 54.55 | 54.69 |
| TraesCS7B01G085800.1 | Wheat | peroxisome, plastid | 53.21 | 54.67 |
| HORVU6Hr1G074960.2 | Barley | cytosol | 54.81 | 54.67 |
| TraesCS6D01G281100.1 | Wheat | plastid | 53.74 | 54.47 |
| TraesCS5A01G190000.1 | Wheat | plastid | 54.28 | 54.42 |
| Os09t0369400-01 | Rice | plastid | 54.01 | 53.87 |
| EER96661 | Sorghum | plastid | 54.81 | 53.81 |
| AT5G10100.1 | Thale cress | plastid | 54.55 | 53.68 |
| TraesCS2B01G187200.1 | Wheat | cytosol, plastid | 51.34 | 53.63 |
| TraesCS2B01G187100.1 | Wheat | cytosol, plastid | 51.34 | 53.63 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 48.66 | 53.53 |
| Zm00001d006913_P002 | Maize | plastid | 47.06 | 53.5 |
| KXG19623 | Sorghum | cytosol | 55.35 | 53.49 |
| GSMUA_Achr7P11700_001 | Banana | plastid | 54.81 | 53.39 |
| TraesCS2A01G161100.1 | Wheat | cytosol, plastid | 51.07 | 53.35 |
| TraesCS2A01G161200.1 | Wheat | cytosol, plastid | 50.53 | 52.79 |
| GSMUA_Achr3P01660_001 | Banana | cytosol, mitochondrion, plastid | 54.81 | 52.7 |
| TraesCS2A01G161000.1 | Wheat | plastid | 50.27 | 52.66 |
| TraesCS2D01G168200.1 | Wheat | cytosol, plastid | 50.0 | 52.23 |
| Zm00001d005658_P001 | Maize | plastid | 53.48 | 52.08 |
| Zm00001d018082_P001 | Maize | cytosol | 55.08 | 51.76 |
| TraesCS2D01G168100.1 | Wheat | cytosol, plastid | 49.47 | 51.68 |
| EER97568 | Sorghum | cytosol, plastid | 48.66 | 51.27 |
| EER97569 | Sorghum | cytosol, plastid | 48.4 | 51.13 |
| TraesCS2B01G187000.1 | Wheat | peroxisome, plastid | 48.93 | 51.12 |
| Zm00001d029371_P001 | Maize | cytosol | 49.73 | 51.1 |
| KXG36741 | Sorghum | cytosol | 49.73 | 51.1 |
| EER94771 | Sorghum | cytosol, peroxisome, plastid | 49.47 | 50.41 |
| Zm00001d020272_P001 | Maize | peroxisome, plastid | 53.74 | 50.38 |
| Zm00001d022192_P002 | Maize | plastid | 49.2 | 49.73 |
| Os07t0624600-01 | Rice | cytosol | 48.4 | 49.45 |
| TraesCS6B01G330900.1 | Wheat | cytosol | 53.74 | 49.39 |
| TraesCS5B01G193100.2 | Wheat | plastid | 54.55 | 49.16 |
| TraesCS2D01G168300.1 | Wheat | peroxisome, plastid | 51.07 | 48.72 |
| Zm00001d022193_P001 | Maize | cytosol | 49.47 | 48.68 |
| TraesCS6A01G301800.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 54.01 | 48.56 |
| HORVU5Hr1G058300.1 | Barley | plastid | 54.81 | 48.01 |
| AT5G51460.3 | Thale cress | nucleus, plastid | 48.93 | 47.53 |
| AT4G12430.1 | Thale cress | plastid | 46.52 | 47.28 |
| AT4G22590.1 | Thale cress | plastid | 47.59 | 47.21 |
| HORVU2Hr1G029290.1 | Barley | golgi, mitochondrion, peroxisome, plastid | 49.73 | 45.93 |
| HORVU1Hr1G061580.4 | Barley | plastid | 23.8 | 43.84 |
| Zm00001d044854_P001 | Maize | cytosol | 48.66 | 42.42 |
| HORVU6Hr1G066240.1 | Barley | plastid | 14.71 | 37.93 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | EntrezGene:844144 | ProteinID:AAG52092.1 | ProteinID:AEE36066.1 |
| EMBL:AF007779 | ProteinID:ANM60001.1 | ArrayExpress:AT1G78090 | EnsemblPlantsGene:AT1G78090 | RefSeq:AT1G78090 | TAIR:AT1G78090 |
| RefSeq:AT1G78090-TAIR-G | EnsemblPlants:AT1G78090.1 | TAIR:AT1G78090.1 | Symbol:ATTPPB | EMBL:BT002801 | EMBL:BT004348 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004805 | GO:GO:0005975 | GO:GO:0005992 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | InterPro:HAD-SF_hydro_IIB |
| InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | RefSeq:NP_001322316.1 | RefSeq:NP_177932.1 | PFAM:PF02358 |
| PO:PO:0000230 | PO:PO:0001185 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF16 | UniProt:Q9C9S4 | SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 |
| TIGRFAMs:TIGR01484 | InterPro:Trehalose_PPase | UniParc:UPI000000BDCE | SEG:seg | : | : |
Description
TPPBTrehalose-phosphate phosphatase B [Source:UniProtKB/Swiss-Prot;Acc:Q9C9S4]
Coordinates
chr1:+:29373803..29376639
Molecular Weight (calculated)
42450.8 Da
IEP (calculated)
8.353
GRAVY (calculated)
-0.384
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNQNVIVSD RKPILGLKTI TVSVSNSPLF SNSFPTYFNF PRRKLLKLLE AADKNNLVVA PKITSMIDSM RDSSPTRLRS SSYDSVSDND DKTSWIVRFP
101: SALNMFDEIV NAAKGKQIVM FLDYDGTLSP IVEDPDKAFI THEMREVVKD VASNFPTAIV TGRSIEKVRS FVQVNEIYYA GSHGMDIEGP TNENSNGQSN
201: ERVLFQPARE FLPMIEKVVN ILEEKTKWIP GAMVENNKFC LSVHFRRVDE KRWPALAEVV KSVLIDYPKL KLTQGRKVLE IRPTIKWDKG QALNFLLKSL
301: GYENSDDVVP VYIGDDRTDE DAFKVLRERG QGFGILVSKV PKDTNASYSL QDPSQVNKFL ERLVEWKRKT VGEE
101: SALNMFDEIV NAAKGKQIVM FLDYDGTLSP IVEDPDKAFI THEMREVVKD VASNFPTAIV TGRSIEKVRS FVQVNEIYYA GSHGMDIEGP TNENSNGQSN
201: ERVLFQPARE FLPMIEKVVN ILEEKTKWIP GAMVENNKFC LSVHFRRVDE KRWPALAEVV KSVLIDYPKL KLTQGRKVLE IRPTIKWDKG QALNFLLKSL
301: GYENSDDVVP VYIGDDRTDE DAFKVLRERG QGFGILVSKV PKDTNASYSL QDPSQVNKFL ERLVEWKRKT VGEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.