CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052227_P001	Maize	cytosol	90.86	94.94
Os02t0753000-01	Rice	cytosol	85.48	86.65
Zm00001d018082_P001	Maize	cytosol	91.13	85.18
TraesCS6D01G281100.1	Wheat	plastid	84.41	85.09
HORVU6Hr1G074960.2	Barley	cytosol	83.06	82.4
TraesCS6B01G330900.1	Wheat	cytosol	83.6	76.41
TraesCS6A01G301800.1	Wheat	cytosol, nucleus, peroxisome, plastid	84.41	75.48
CDY26849	Canola	mitochondrion	41.67	66.52
EES13815	Sorghum	peroxisome	66.4	65.69
KXG19623	Sorghum	cytosol	66.94	64.34
VIT_18s0001g05300.t01	Wine grape	plastid	63.71	63.2
Solyc04g072920.2.1	Tomato	extracellular	61.29	62.47
EER96661	Sorghum	plastid	63.17	61.68
PGSC0003DMT400024511	Potato	peroxisome, plastid	60.22	61.37
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	60.22	60.38
KRH49582	Soybean	mitochondrion	46.24	60.35
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	59.41	59.41
KRH30218	Soybean	plastid	34.14	59.35
EER97569	Sorghum	cytosol, plastid	55.65	58.47
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	50.27	58.44
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	59.68	58.42
EER97568	Sorghum	cytosol, plastid	55.65	58.31
AT1G35910.1	Thale cress	plastid	57.8	58.27
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	59.14	58.05
Bra008344.1-P	Field mustard	plastid	57.8	57.03
CDY14635	Canola	plastid	57.8	57.03
KXG36741	Sorghum	cytosol	55.65	56.87
CDY26848	Canola	plastid	57.8	56.73
CDX87477	Canola	plastid	57.53	56.61
Bra015631.1-P	Field mustard	plastid	57.53	56.61
AT1G78090.1	Thale cress	plastid	56.72	56.42
EER94771	Sorghum	cytosol, peroxisome, plastid	55.65	56.4
CDX88416	Canola	plastid	57.26	56.35
OQU89957	Sorghum	cytosol	44.09	51.57
OQU85690	Sorghum	nucleus, plastid	48.92	49.19
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	35.22	48.16
EER91963	Sorghum	cytosol	49.19	47.91
OQU89414	Sorghum	cytosol	18.82	41.42
Bra034400.1-P	Field mustard	plastid	24.73	35.38
CDY37091	Canola	plastid	24.73	35.38

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EntrezGene:8066409	UniProt:A0A194YSH4	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0004831	GO:GO:0005488	GO:GO:0005524
GO:GO:0005975	GO:GO:0005992	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0019538
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	EnsemblPlants:KXG30780	ProteinID:KXG30780
ProteinID:KXG30780.2	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF10	EnsemblPlantsGene:SORBI_3004G232900	SUPFAM:SSF56784
TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	TMHMM:TMhelix	InterPro:Trehalose_PPase	UniParc:UPI000B8BAFAA	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:58178308..58181164

Molecular Weight (calculated)

40547.9 Da

IEP (calculated)

8.610

GRAVY (calculated)

-0.155

Length

372 amino acids

Sequence
(BLAST)

001: MTNQDVVVSE MGIAAGAALP GASPALLACR GAAAGAMSLR YLDLAAAAAR SASCTWVDAM RASSPTRSRA AADVDEFTAW MRKHPSALAK FEQIASASKG
101: KKVVMFLDYD GTLSPIVADP DAAYMSDAMR AAVRDVAKHF PTAIVSGRCR DKVRNFVDLS ELYYAGSHGM DIKGPSSNPE SVLCQPASEF LPVIDEVYKA
201: LVEKTKSTPG AKVENNKFCL SVHFRCVDEK RWNALAEQVK AVIKDYPKLK LTQGRKVLEI RPSIMWDKGK ALEFLLESLA DDTPPILRCL PPGFANCSDV
301: LPVYIGDDRT DEDAFKVLRK RGQGIGILVS KCPKETNASY SLQDPGEVMD FLLRLAEWKR KSSAPPMIRP RV

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.