CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97569	Sorghum	cytosol, plastid	95.77	96.05
Zm00001d006913_P002	Maize	plastid	83.94	90.58
Zm00001d022192_P002	Maize	plastid	90.14	86.49
TraesCS2B01G187100.1	Wheat	cytosol, plastid	72.11	71.51
TraesCS2A01G161000.1	Wheat	plastid	71.55	71.15
TraesCS2A01G161100.1	Wheat	cytosol, plastid	71.55	70.95
TraesCS2D01G168200.1	Wheat	cytosol, plastid	70.99	70.39
TraesCS2D01G168100.1	Wheat	cytosol, plastid	70.42	69.83
TraesCS2B01G187200.1	Wheat	cytosol, plastid	70.42	69.83
TraesCS2B01G187000.1	Wheat	peroxisome, plastid	69.86	69.27
TraesCS2A01G161200.1	Wheat	cytosol, plastid	69.86	69.27
Os07t0624600-01	Rice	cytosol	66.76	64.75
KXG36741	Sorghum	cytosol	66.2	64.56
TraesCS2D01G168300.1	Wheat	peroxisome, plastid	70.99	64.29
HORVU2Hr1G029290.1	Barley	golgi, mitochondrion, peroxisome, plastid	71.55	62.72
KRH30218	Soybean	plastid	37.18	61.68
EER94771	Sorghum	cytosol, peroxisome, plastid	62.54	60.49
CDY26849	Canola	mitochondrion	39.44	60.09
KRH49582	Soybean	mitochondrion	47.89	59.65
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	55.77	59.64
VIT_18s0001g05300.t01	Wine grape	plastid	61.13	57.87
GSMUA_Achr10P...	Banana	cytosol, plastid	55.21	57.65
EER96661	Sorghum	plastid	61.13	56.96
EES13815	Sorghum	peroxisome	60.28	56.91
GSMUA_Achr2P14790_001	Banana	cytosol	59.15	56.45
GSMUA_Achr4P24170_001	Banana	cytosol	60.28	55.73
GSMUA_Achr7P11700_001	Banana	plastid	60.28	55.73
KXG30780	Sorghum	cytosol	58.31	55.65
Solyc04g072920.2.1	Tomato	extracellular	56.62	55.07
PGSC0003DMT400024511	Potato	peroxisome, plastid	56.06	54.52
AT1G35910.1	Thale cress	plastid	56.62	54.47
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	49.01	54.38
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.34	53.91
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.06	53.49
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.34	52.63
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	55.77	52.24
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	56.62	51.67
Bra008344.1-P	Field mustard	plastid	53.52	50.4
KXG19623	Sorghum	cytosol	54.93	50.39
CDY26848	Canola	plastid	53.52	50.13
CDY14635	Canola	plastid	52.96	49.87
Bra015631.1-P	Field mustard	plastid	52.68	49.47
CDX88416	Canola	plastid	52.39	49.21
CDX87477	Canola	plastid	52.39	49.21
AT1G78090.1	Thale cress	plastid	51.27	48.66
OQU89957	Sorghum	cytosol	43.1	48.11
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	36.62	47.79
OQU85690	Sorghum	nucleus, plastid	48.17	46.22
EER91963	Sorghum	cytosol	47.89	44.5
OQU89414	Sorghum	cytosol	19.44	40.83
CDY37091	Canola	plastid	25.35	34.62
Bra034400.1-P	Field mustard	plastid	25.35	34.62

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EntrezGene:8061569	UniProt:C5X2J1	EnsemblPlants:EER97568
ProteinID:EER97568	ProteinID:EER97568.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358
PANTHER:PTHR43768	PANTHER:PTHR43768:SF7	EnsemblPlantsGene:SORBI_3002G381400	SUPFAM:SSF56784	unigene:Sbi.13100	TIGRFAMs:TIGR00685
TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0001A8399D	RefSeq:XP_002461047.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:73735312..73738963

Molecular Weight (calculated)

39050.7 Da

IEP (calculated)

8.213

GRAVY (calculated)

-0.253

Length

355 amino acids

Sequence
(BLAST)

001: MTKHTAFAAD DAITAAAVTS QPGRRFTSYP PPTRARGGCR VAAAAAAARQ ATDPGAVVVA VGSLPELVPR HADLDFENWM EKHPSALAEF ESVLAAAKGK
101: QIVMFLDYDG TLSPIVKDPD SAVMSEEMRD AVRGVAEHFP TAIVSGRCRD KVFNFVKLAE LYYAGSHGMD IKGPTAQSKH TKAKAEAVLC QPASAFLPVI
201: DEVYRTLTAR TAPIPGATVE NNKFCLSVHF RCVHEEKWRA LEEQVRSVLK EYPDLRLTKG RKVLEIRPSI EWDKGNALQF LLESLGFADS NNVFPIYIGD
301: DRTDEDAFKV LRSMGQGIGI LVSKIPKETS ASYSLREPSE VKEFLRKLVR SKQRD

Best Arabidopsis Sequence Match ( AT5G10100.3 )
(BLAST)

001: MSASQNIVVS ETTMSSIIPN NNNNNNNSSS QKLPPCLISI SKKKLLKNID IINGGGQRIN AWVDSMRASS PTHLKSLPSS ISTQQQLNSW IMQHPSALEK
101: FEQIMEASRG KQIVMFLDYD GTLSPIVDDP DKAFMSSKMR RTVKKLAKCF PTAIVTGRCI DKVYNFVKLA ELYYAGSHGM DIKGPAKGFS RHKRVKQSLL
201: YQPANDYLPM IDEVYRQLLE KTKSTPGAKV ENHKFCASVH FRCVDEKKWS ELVLQVRSVL KKFPTLQLTQ GRKVFEIRPM IEWDKGKALE FLLESLGFGN
301: TNNVFPVYIG DDRTDEDAFK MLRDRGEGFG ILVSKFPKDT DASYSLQDPS EVMDFLRRLV EWKQMQPRM

Arabidopsis Description

TPPITrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A2H1ZE62]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.