CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015631.1-P	Field mustard	plastid	97.35	97.35
CDX87477	Canola	plastid	97.35	97.35
CDY14635	Canola	plastid	91.01	91.25
CDY26848	Canola	plastid	90.48	90.24
CDY26849	Canola	mitochondrion	53.44	86.7
AT1G78090.1	Thale cress	plastid	85.19	86.1
CDY70318	Canola	mitochondrion	38.89	63.09
Solyc04g072920.2.1	Tomato	extracellular	59.79	61.92
PGSC0003DMT400024511	Potato	peroxisome, plastid	59.79	61.92
VIT_18s0001g05300.t01	Wine grape	plastid	59.79	60.27
Zm00001d052227_P001	Maize	cytosol	55.82	59.27
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	51.85	59.04
CDX94101	Canola	cytosol	15.61	58.42
Os03t0386500-01	Rice	cytosol, extracellular, peroxisome	47.35	57.74
EES13815	Sorghum	peroxisome	57.41	57.71
Os08t0409100-01	Rice	peroxisome	56.35	57.57
Os02t0753000-01	Rice	cytosol	55.82	57.49
KXG30780	Sorghum	cytosol	56.35	57.26
CDY15842	Canola	cytosol	50.79	56.8
CDY31283	Canola	plastid	56.35	56.8
Zm00001d032298_P002	Maize	plastid	55.82	56.72
HORVU7Hr1G037140.1	Barley	plastid	54.23	56.63
CDY08815	Canola	plastid	54.23	56.47
TraesCS7D01G182600.1	Wheat	peroxisome, plastid	54.23	56.47
CDY63411	Canola	cytosol	50.53	56.34
TraesCS7A01G180800.1	Wheat	peroxisome, plastid	53.7	56.23
CDX90361	Canola	cytosol, peroxisome, plastid	52.38	55.93
TraesCS6D01G281100.1	Wheat	plastid	54.5	55.83
TraesCS7B01G085800.1	Wheat	peroxisome, plastid	53.7	55.77
HORVU6Hr1G074960.2	Barley	cytosol	55.29	55.73
Os09t0369400-01	Rice	plastid	54.76	55.2
KXG19623	Sorghum	cytosol	56.35	55.04
TraesCS5D01G200800.1	Wheat	plastid	54.23	54.96
EER96661	Sorghum	plastid	55.29	54.86
GSMUA_Achr10P...	Banana	cytosol, plastid	49.21	54.71
TraesCS5A01G190000.1	Wheat	plastid	53.97	54.69
GSMUA_Achr4P24170_001	Banana	cytosol	55.03	54.17
Zm00001d006913_P002	Maize	plastid	47.09	54.1
CDY39454	Canola	cytosol	34.39	53.94
GSMUA_Achr2P14790_001	Banana	cytosol	52.91	53.76
Zm00001d005658_P001	Maize	plastid	54.5	53.65
CDY22393	Canola	cytosol	52.65	53.64
TraesCS2B01G187200.1	Wheat	cytosol, plastid	50.79	53.63
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	55.03	53.47
TraesCS2B01G187100.1	Wheat	cytosol, plastid	50.53	53.35
TraesCS2A01G161000.1	Wheat	plastid	50.26	53.22
GSMUA_Achr7P11700_001	Banana	plastid	53.7	52.86
TraesCS2A01G161200.1	Wheat	cytosol, plastid	50.0	52.79
TraesCS2A01G161100.1	Wheat	cytosol, plastid	50.0	52.79
EER97569	Sorghum	cytosol, plastid	49.21	52.54
TraesCS2D01G168100.1	Wheat	cytosol, plastid	49.74	52.51
Zm00001d018082_P001	Maize	cytosol	55.29	52.51
CDX72676	Canola	mitochondrion	52.91	52.49
EER97568	Sorghum	cytosol, plastid	49.21	52.39
TraesCS2B01G187000.1	Wheat	peroxisome, plastid	49.21	51.96
TraesCS2D01G168200.1	Wheat	cytosol, plastid	48.94	51.68
Zm00001d020272_P001	Maize	peroxisome, plastid	54.23	51.38
KXG36741	Sorghum	cytosol	49.47	51.37
Zm00001d022192_P002	Maize	plastid	50.26	51.35
EER94771	Sorghum	cytosol, peroxisome, plastid	49.74	51.23
Zm00001d029371_P001	Maize	cytosol	49.21	51.1
TraesCS6B01G330900.1	Wheat	cytosol	54.5	50.61
Os07t0624600-01	Rice	cytosol	48.41	50.0
TraesCS6A01G301800.1	Wheat	cytosol, nucleus, peroxisome, plastid	54.76	49.76
TraesCS5B01G193100.2	Wheat	plastid	54.23	49.4
Zm00001d022193_P001	Maize	cytosol	49.47	49.21
TraesCS2D01G168300.1	Wheat	peroxisome, plastid	50.53	48.72
CDY66417	Canola	plastid	48.41	48.28
HORVU5Hr1G058300.1	Barley	plastid	54.5	48.24
CDY56658	Canola	plastid	48.15	48.02
CDX98760	Canola	nucleus	45.77	47.79
CDY00477	Canola	plastid	48.68	47.67
CDX94103	Canola	nucleus	45.24	47.24
CDX99919	Canola	plastid	48.15	47.03
HORVU2Hr1G029290.1	Barley	golgi, mitochondrion, peroxisome, plastid	50.0	46.67
CDX82953	Canola	plastid	45.77	46.13
CDX79165	Canola	plastid	45.77	46.13
HORVU1Hr1G061580.4	Barley	plastid	24.6	45.81
CDY14544	Canola	endoplasmic reticulum, plasma membrane	54.23	45.15
CDX90831	Canola	mitochondrion	8.47	44.44
Zm00001d044854_P001	Maize	cytosol	48.41	42.66
CDY37091	Canola	plastid	27.51	40.0
HORVU6Hr1G066240.1	Barley	plastid	14.81	38.62
CDX98758	Canola	cytosol, nucleus, peroxisome	15.08	38.0

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:A0A078DGL2	EnsemblPlants:CDX88416	ProteinID:CDX88416
ProteinID:CDX88416.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00147956001
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF16	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0004EE306D

Description

BnaC06g38600D

Coordinates

chrLK031855:+:894600..897118

Molecular Weight (calculated)

42666.0 Da

IEP (calculated)

8.769

GRAVY (calculated)

-0.378

Length

378 amino acids

Sequence
(BLAST)

001: MMNQNVIVSD RKAILGSKTI TVSNSPLFSS PPTYFTFPRH KFLELLEAAD KNSNSINKNN LGAGKIASWV DSMRDSSPTR LRPSSRDSVS DNDHKTSWIV
101: RFPSALNMFD EIVNAAKGKQ IVMFLDYDGT LSPIVEDPDK AYITHEMREV VKNVALNFPT AIVTGRSIDK VRGFVKLDEI YYAGSHGMDI EGPTSEYAYG
201: GVSNQGVLFQ PAREFVPTIE KVYKILEEKT KWIPGAMVEN NKFCLSVHFR RVDEKRWAGL AEQVKSVLID YPQLKLTQGR KVLEIRPTIK WDKGQALNFL
301: LKSLGFEKSE DVVPVYIGDD LTDEDAFKVL RERGQGFGIL VSKVPKETDA SYSLQDPSQV NEFLRRLVEW KRKTVGEA

Best Arabidopsis Sequence Match ( AT1G78090.1 )
(BLAST)

001: MTNQNVIVSD RKPILGLKTI TVSVSNSPLF SNSFPTYFNF PRRKLLKLLE AADKNNLVVA PKITSMIDSM RDSSPTRLRS SSYDSVSDND DKTSWIVRFP
101: SALNMFDEIV NAAKGKQIVM FLDYDGTLSP IVEDPDKAFI THEMREVVKD VASNFPTAIV TGRSIEKVRS FVQVNEIYYA GSHGMDIEGP TNENSNGQSN
201: ERVLFQPARE FLPMIEKVVN ILEEKTKWIP GAMVENNKFC LSVHFRRVDE KRWPALAEVV KSVLIDYPKL KLTQGRKVLE IRPTIKWDKG QALNFLLKSL
301: GYENSDDVVP VYIGDDRTDE DAFKVLRERG QGFGILVSKV PKDTNASYSL QDPSQVNKFL ERLVEWKRKT VGEE

Arabidopsis Description

TPPBTrehalose-phosphate phosphatase B [Source:UniProtKB/Swiss-Prot;Acc:Q9C9S4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.