Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G066240.1 | Barley | plastid | 67.49 | 94.48 |
| TraesCS5D01G200800.1 | Wheat | plastid | 86.7 | 47.19 |
| TraesCS5A01G190000.1 | Wheat | plastid | 86.7 | 47.19 |
| HORVU5Hr1G058300.1 | Barley | plastid | 91.63 | 43.56 |
| TraesCS5B01G193100.2 | Wheat | plastid | 88.67 | 43.37 |
| Os09t0369400-01 | Rice | plastid | 78.82 | 42.67 |
| EER96661 | Sorghum | plastid | 73.4 | 39.11 |
| Zm00001d005658_P001 | Maize | plastid | 73.4 | 38.8 |
| Zm00001d020272_P001 | Maize | peroxisome, plastid | 74.38 | 37.84 |
| HORVU6Hr1G074960.2 | Barley | cytosol | 53.69 | 29.07 |
| Bra034400.1-P | Field mustard | plastid | 36.45 | 28.46 |
| CDY37091 | Canola | plastid | 36.45 | 28.46 |
| VIT_18s0001g05300.t01 | Wine grape | plastid | 51.23 | 27.73 |
| KRH30218 | Soybean | plastid | 28.57 | 27.1 |
| AT1G35910.1 | Thale cress | plastid | 48.77 | 26.83 |
| KRH49582 | Soybean | mitochondrion | 37.44 | 26.67 |
| Solyc04g072920.2.1 | Tomato | extracellular | 47.29 | 26.3 |
| HORVU7Hr1G037140.1 | Barley | plastid | 46.8 | 26.24 |
| PGSC0003DMT400024511 | Potato | peroxisome, plastid | 46.8 | 26.03 |
| HORVU2Hr1G029290.1 | Barley | golgi, mitochondrion, peroxisome, plastid | 51.23 | 25.68 |
| KRH62370 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 46.31 | 25.34 |
| KRH18894 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 45.81 | 25.0 |
| Bra015631.1-P | Field mustard | plastid | 46.31 | 24.87 |
| Bra008344.1-P | Field mustard | plastid | 45.81 | 24.67 |
| CDY14635 | Canola | plastid | 45.81 | 24.67 |
| CDX88416 | Canola | plastid | 45.81 | 24.6 |
| KRH16701 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 45.81 | 24.54 |
| KRH53087 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 45.81 | 24.47 |
| CDX87477 | Canola | plastid | 45.32 | 24.34 |
| CDY26848 | Canola | plastid | 45.32 | 24.27 |
| HORVU6Hr1G063370.1 | Barley | plastid | 44.34 | 24.26 |
| HORVU0Hr1G023540.3 | Barley | plastid | 44.34 | 24.26 |
| AT1G78090.1 | Thale cress | plastid | 43.84 | 23.8 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 35.47 | 22.5 |
| HORVU2Hr1G097300.2 | Barley | plastid | 40.39 | 22.34 |
| HORVU1Hr1G053770.2 | Barley | plastid | 41.87 | 21.68 |
| HORVU2Hr1G104360.2 | Barley | cytosol, peroxisome, plastid | 31.53 | 21.62 |
| HORVU4Hr1G036870.1 | Barley | mitochondrion | 19.21 | 18.31 |
| CDY26849 | Canola | mitochondrion | 16.26 | 14.16 |
| HORVU3Hr1G015310.1 | Barley | extracellular | 10.34 | 8.24 |
| HORVU2Hr1G075440.2 | Barley | cytosol | 1.97 | 3.05 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G061580.4 | EnsemblPlantsGene:HORVU1Hr1G061580 | Gene3D:3.40.50.1000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0005992 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HAD-like_sf |
| InterPro:HAD_sf | InterPro:IPR023214 | InterPro:Trehalose_PPase | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF13 | PFAM:PF02358 |
| SEG:seg | SUPFAM:SSF56784 | UniParc:UPI000B474A05 | UniProt:A0A287FVR6 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr1H:-:445264975..445266074
Molecular Weight (calculated)
21844.5 Da
IEP (calculated)
7.462
GRAVY (calculated)
0.003
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: WPPSSMPVVS EVGITVTAAT ATACPCPGSL FPYPPPRAGM AVSRKCLRAA QAELGAGMLS GLVESMRASS PTHARAAAAL AAGVDDEHAA WMARHPSALA
101: KFEEIVAASK GKQIVMFLDY DGTLSPIVDD PDAAFMSETM RMAVRSMAKH FPTAIVSGRC RDKVFEFVKL AELYYAGSHG MDIKGPEMLR RIKRLINQWD
201: CDE
101: KFEEIVAASK GKQIVMFLDY DGTLSPIVDD PDAAFMSETM RMAVRSMAKH FPTAIVSGRC RDKVFEFVKL AELYYAGSHG MDIKGPEMLR RIKRLINQWD
201: CDE
001: MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK SLLKQSSWLT EHPSALDMFE EILHLSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVN
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVN
Arabidopsis Description
TPPHProbable trehalose-phosphate phosphatase H [Source:UniProtKB/Swiss-Prot;Acc:Q8GWG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.