CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid, vacuole
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020272_P001	Maize	peroxisome, plastid	89.24	85.21
Zm00001d005658_P001	Maize	plastid	85.56	84.9
Os09t0369400-01	Rice	plastid	82.94	84.27
TraesCS5D01G200800.1	Wheat	plastid	81.1	82.84
TraesCS5A01G190000.1	Wheat	plastid	81.1	82.84
EES13815	Sorghum	peroxisome	77.95	78.99
TraesCS5B01G193100.2	Wheat	plastid	81.63	74.94
HORVU5Hr1G058300.1	Barley	plastid	82.41	73.54
HORVU1Hr1G061580.4	Barley	plastid	39.11	73.4
HORVU6Hr1G066240.1	Barley	plastid	25.46	66.9
CDY26849	Canola	mitochondrion	39.9	65.24
KXG30780	Sorghum	cytosol	61.68	63.17
EER97568	Sorghum	cytosol, plastid	56.96	61.13
VIT_18s0001g05300.t01	Wine grape	plastid	59.84	60.8
EER97569	Sorghum	cytosol, plastid	55.91	60.17
KRH49582	Soybean	mitochondrion	44.88	60.0
AT1G35910.1	Thale cress	plastid	57.74	59.62
KRH30218	Soybean	plastid	33.07	58.88
Solyc04g072920.2.1	Tomato	extracellular	56.17	58.63
PGSC0003DMT400024511	Potato	peroxisome, plastid	55.64	58.08
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.43	57.8
EER94771	Sorghum	cytosol, peroxisome, plastid	55.64	57.77
KXG19623	Sorghum	cytosol	58.53	57.62
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	47.77	56.88
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	55.38	56.87
KXG36741	Sorghum	cytosol	54.07	56.59
Bra008344.1-P	Field mustard	plastid	55.64	56.23
Bra015631.1-P	Field mustard	plastid	55.64	56.08
CDY14635	Canola	plastid	55.38	55.97
CDY26848	Canola	plastid	55.64	55.94
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	55.64	55.94
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	55.64	55.79
CDX87477	Canola	plastid	55.12	55.56
CDX88416	Canola	plastid	54.86	55.29
AT1G78090.1	Thale cress	plastid	53.81	54.81
OQU89957	Sorghum	cytosol	45.41	54.4
OQU85690	Sorghum	nucleus, plastid	51.71	53.24
EER91963	Sorghum	cytosol	48.82	48.69
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	33.86	47.43
OQU89414	Sorghum	cytosol	17.59	39.65
Bra034400.1-P	Field mustard	plastid	24.67	36.15
CDY37091	Canola	plastid	24.67	36.15

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	EntrezGene:8065371	UniProt:C5XBB3	EnsemblPlants:EER96661	ProteinID:EER96661
ProteinID:EER96661.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF13	EnsemblPlantsGene:SORBI_3002G184600	SUPFAM:SSF56784	unigene:Sbi.6337	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484
InterPro:Trehalose_PPase	UniParc:UPI00018C99A6	RefSeq:XP_002460140.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:56856271..56858640

Molecular Weight (calculated)

41689.6 Da

IEP (calculated)

9.372

GRAVY (calculated)

-0.104

Length

381 amino acids

Sequence
(BLAST)

001: MAKPSVAAVP EVVGVPAAAQ ATTLFPYPPP RGAGITAAVV RRKCLQVELG AGAAGPLLGG ACWGVESMRA SSPTHAKAAA ALAAGVDEER RAAWTVRHPS
101: ALGKFEQIVA ASEGKRIVMF LDYDGTLSPI VDDPDAAFMS ETMRMAVRSV AKHFPTAIVS GRCRDKVFEF VKLAELYYAG SHGMDIRGPA KASSRHAKAK
201: AKGVLFQPAS EFLPMIEEVH DRLVETTRCI PGAKVENNKF CVSVHFRCVD EKMWGELSES VKGVLREYPK LRLTQGRMVF EVRPTIKWDK GKALEFLLES
301: LGFADCSNVL PVYIGDDRTD EDAFKVLRRR GQGHGVGILV SKHPKETSAS YSLQEPAEVM EFLLRLVEWK QLSRARLIRL Q

Best Arabidopsis Sequence Match ( AT5G10100.3 )
(BLAST)

001: MSASQNIVVS ETTMSSIIPN NNNNNNNSSS QKLPPCLISI SKKKLLKNID IINGGGQRIN AWVDSMRASS PTHLKSLPSS ISTQQQLNSW IMQHPSALEK
101: FEQIMEASRG KQIVMFLDYD GTLSPIVDDP DKAFMSSKMR RTVKKLAKCF PTAIVTGRCI DKVYNFVKLA ELYYAGSHGM DIKGPAKGFS RHKRVKQSLL
201: YQPANDYLPM IDEVYRQLLE KTKSTPGAKV ENHKFCASVH FRCVDEKKWS ELVLQVRSVL KKFPTLQLTQ GRKVFEIRPM IEWDKGKALE FLLESLGFGN
301: TNNVFPVYIG DDRTDEDAFK MLRDRGEGFG ILVSKFPKDT DASYSLQDPS EVMDFLRRLV EWKQMQPRM

Arabidopsis Description

TPPITrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A2H1ZE62]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.