CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
peroxisome 1
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047110_P001	Maize	cytosol	95.81	96.06
Os10t0553300-01	Rice	cytosol, nucleus, peroxisome	82.46	82.46
TraesCS1A01G210400.1	Wheat	plastid	81.41	81.63
TraesCS1D01G213700.1	Wheat	plastid	81.15	81.36
HORVU2Hr1G075440.2	Barley	cytosol	27.75	80.92
HORVU4Hr1G036870.1	Barley	mitochondrion	44.76	80.28
HORVU1Hr1G053770.2	Barley	plastid	79.32	77.3
HORVU2Hr1G104360.2	Barley	cytosol, peroxisome, plastid	58.64	75.68
TraesCS1B01G224300.2	Wheat	golgi, vacuole	80.63	70.32
Solyc03g083960.2.1	Tomato	plastid	61.26	63.76
VIT_16s0022g00660.t01	Wine grape	plastid	63.87	63.38
PGSC0003DMT400035990	Potato	peroxisome, plastid	63.61	63.28
KRH39976	Soybean	peroxisome	61.78	60.67
KRH62612	Soybean	cytosol	59.95	59.95
KRH23805	Soybean	cytosol	60.73	59.64
KRH56343	Soybean	cytosol	59.95	58.42
AT5G51460.3	Thale cress	nucleus, plastid	58.64	58.18
Bra022549.1-P	Field mustard	cytosol, plastid	57.59	58.05
CDY66417	Canola	plastid	57.59	58.05
OQU89957	Sorghum	cytosol	48.17	57.86
CDY56658	Canola	plastid	57.33	57.78
Bra028254.1-P	Field mustard	plastid	57.33	57.33
CDY00477	Canola	plastid	57.85	57.25
CDX99919	Canola	plastid	57.59	56.85
OQU85690	Sorghum	nucleus, plastid	54.19	55.95
EES13815	Sorghum	peroxisome	49.21	50.0
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	35.08	49.26
KXG30780	Sorghum	cytosol	47.91	49.19
EER94771	Sorghum	cytosol, peroxisome, plastid	47.12	49.05
EER96661	Sorghum	plastid	48.69	48.82
EER97569	Sorghum	cytosol, plastid	44.5	48.02
EER97568	Sorghum	cytosol, plastid	44.5	47.89
KXG36741	Sorghum	cytosol	44.76	46.98
KXG19623	Sorghum	cytosol	46.07	45.48
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	22.25	37.95
OQU89414	Sorghum	cytosol	16.49	37.28

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EntrezGene:8058110	UniProt:C5WSJ2	EnsemblPlants:EER91963
ProteinID:EER91963	ProteinID:EER91963.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358
PANTHER:PTHR43768	PANTHER:PTHR43768:SF6	EnsemblPlantsGene:SORBI_3001G303900	SUPFAM:SSF56784	unigene:Sbi.2162	TIGRFAMs:TIGR00685
TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0001A82527	RefSeq:XP_002464965.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:58760776..58765082

Molecular Weight (calculated)

42695.7 Da

IEP (calculated)

4.854

GRAVY (calculated)

-0.306

Length

382 amino acids

Sequence
(BLAST)

001: MDLKTGLNSP VIADHLPTLA SPAAVMTFTT PTSFPSPGLC LNTTKKIPLP GKIEEVRATG WLDLMKASSP TRKRQTKDAI CDTQSDDLDL QYRNWTVNYP
101: SALTSFEEIS DLAGNKRLAL FLDYDGTLSP IVDNPENALM SDEMRAAVRH VASLFPTAII SGRSRDKVFD FVNLNELYYA GSHGMDIMGP VRKTTDSNGV
201: ECIRSTDAHG KEVNLFQPAS EFLPMITEVY EKLGESVKDI DGARMEDNKF CVSVHYRNVA EDDYKKVFHR VSAVLEDYPC LRLTHGRKVF EVRPVIDWNK
301: GKAVEFLLES LGLNESEDVL PIYVGDDRTD EDAFKVLKAS NRGFGILVSS IPKESDAFYS LRDPAEVMEF LRMLAAWKEQ ST

Best Arabidopsis Sequence Match ( AT4G22590.1 )
(BLAST)

001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF

Arabidopsis Description

TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.