Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- peroxisome 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66417 | Canola | plastid | 91.69 | 93.14 |
| CDY56658 | Canola | plastid | 91.69 | 93.14 |
| Bra022549.1-P | Field mustard | cytosol, plastid | 91.17 | 92.61 |
| CDY00477 | Canola | plastid | 89.87 | 89.64 |
| Bra028254.1-P | Field mustard | plastid | 88.83 | 89.53 |
| CDX99919 | Canola | plastid | 89.87 | 89.41 |
| Solyc03g083960.2.1 | Tomato | plastid | 67.53 | 70.84 |
| PGSC0003DMT400035990 | Potato | peroxisome, plastid | 69.87 | 70.05 |
| VIT_16s0022g00660.t01 | Wine grape | plastid | 69.35 | 69.35 |
| KRH23805 | Soybean | cytosol | 69.61 | 68.89 |
| KRH39976 | Soybean | peroxisome | 69.09 | 68.38 |
| HORVU2Hr1G075440.2 | Barley | cytosol | 22.86 | 67.18 |
| HORVU4Hr1G036870.1 | Barley | mitochondrion | 35.84 | 64.79 |
| KRH62612 | Soybean | cytosol | 64.16 | 64.66 |
| KRH56343 | Soybean | cytosol | 64.42 | 63.27 |
| AT4G12430.1 | Thale cress | plastid | 59.48 | 62.23 |
| HORVU2Hr1G104360.2 | Barley | cytosol, peroxisome, plastid | 47.27 | 61.49 |
| AT4G22590.1 | Thale cress | plastid | 59.48 | 60.74 |
| TraesCS1A01G210400.1 | Wheat | plastid | 59.22 | 59.84 |
| TraesCS1D01G213700.1 | Wheat | plastid | 58.96 | 59.58 |
| Os10t0553300-01 | Rice | cytosol, nucleus, peroxisome | 58.44 | 58.9 |
| EER91963 | Sorghum | cytosol | 58.18 | 58.64 |
| Zm00001d047110_P001 | Maize | cytosol | 56.88 | 57.48 |
| HORVU1Hr1G053770.2 | Barley | plastid | 57.92 | 56.89 |
| AT1G35910.1 | Thale cress | plastid | 51.43 | 53.66 |
| TraesCS1B01G224300.2 | Wheat | golgi, vacuole | 58.96 | 51.83 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 42.08 | 50.62 |
| AT4G39770.1 | Thale cress | cytosol | 45.45 | 50.14 |
| AT1G78090.1 | Thale cress | plastid | 47.53 | 48.93 |
| AT2G22190.1 | Thale cress | cytosol, nucleus, peroxisome | 44.94 | 48.87 |
| AT5G65140.1 | Thale cress | plastid | 46.75 | 48.65 |
| AT5G10100.1 | Thale cress | plastid | 47.53 | 48.16 |
| GSMUA_Achr2P18630_001 | Banana | cytosol, peroxisome, plastid | 23.64 | 40.62 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.40.50.1000 | EntrezGene:835220 | UniProt:A0A178UCG0 | ProteinID:AED96085.1 | ProteinID:AED96086.1 |
| ProteinID:AED96087.1 | EMBL:AF007778 | ProteinID:ANM70853.1 | ProteinID:ANM70854.1 | ArrayExpress:AT5G51460 | EnsemblPlantsGene:AT5G51460 |
| RefSeq:AT5G51460 | TAIR:AT5G51460 | RefSeq:AT5G51460-TAIR-G | EnsemblPlants:AT5G51460.3 | TAIR:AT5G51460.3 | Symbol:ATTPPA |
| EMBL:AY093147 | ProteinID:BAB08662.1 | EMBL:BT008467 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004805 |
| GO:GO:0005975 | GO:GO:0005992 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016311 | GO:GO:0016787 | InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 |
| RefSeq:NP_001332431.1 | RefSeq:NP_001332432.1 | RefSeq:NP_199959.2 | RefSeq:NP_851171.1 | RefSeq:NP_974922.1 | UniProt:O64896 |
| ProteinID:OAO91365.1 | PFAM:PF02358 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR43768 | PANTHER:PTHR43768:SF6 | SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | InterPro:Trehalose_PPase |
| UniParc:UPI0000048C49 | : | : | : | : | : |
Description
TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
Coordinates
chr5:+:20901537..20904536
Molecular Weight (calculated)
43194.6 Da
IEP (calculated)
6.632
GRAVY (calculated)
-0.344
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMQL
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.