Factsheet for AT4G39770.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011835.1-P	Field mustard	cytosol	89.97	91.01
CDY70318	Canola	mitochondrion	60.46	90.56
Bra010658.1-P	Field mustard	cytosol	87.39	88.41
CDX90361	Canola	cytosol, peroxisome, plastid	87.68	86.44
CDY39454	Canola	cytosol	59.31	85.89
Bra033634.1-P	Field mustard	cytosol	89.11	83.83
CDY22393	Canola	cytosol	88.83	83.56
CDX72676	Canola	mitochondrion	86.82	79.53
AT2G22190.1	Thale cress	cytosol, nucleus, peroxisome	79.08	77.97
PGSC0003DMT400056161	Potato	cytosol	45.56	74.3
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	64.76	71.29
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	54.15	67.99
Solyc05g051880.2.1	Tomato	plastid	52.72	65.71
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	68.19	63.81
AT5G65140.1	Thale cress	plastid	67.05	63.24
AT5G10100.1	Thale cress	plastid	67.62	62.11
PGSC0003DMT400053144	Potato	plastid	68.19	61.66
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	55.59	60.62
AT1G35910.1	Thale cress	plastid	59.89	56.64
GSMUA_AchrUn_...	Banana	peroxisome	59.6	55.76
GSMUA_Achr6P30350_001	Banana	plastid	57.02	55.59
GSMUA_Achr10P...	Banana	plastid	58.74	55.41
GSMUA_Achr10P...	Banana	plastid	62.46	53.96
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	57.59	53.6
AT1G78090.1	Thale cress	plastid	57.31	53.48
AT4G12430.1	Thale cress	plastid	49.57	47.01
AT4G22590.1	Thale cress	plastid	49.57	45.89
AT5G51460.3	Thale cress	nucleus, plastid	50.14	45.45
OQU89414	Sorghum	cytosol	20.06	41.42

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EntrezGene:830135	ProteinID:AEE87117.1	EMBL:AK118867
ArrayExpress:AT4G39770	EnsemblPlantsGene:AT4G39770	RefSeq:AT4G39770	TAIR:AT4G39770	RefSeq:AT4G39770-TAIR-G	EnsemblPlants:AT4G39770.1
TAIR:AT4G39770.1	Unigene:At.31063	EMBL:BT005555	ProteinID:CAA18763.1	ProteinID:CAB80640.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004805	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	RefSeq:NP_195687.2	PFAM:PF02358	PO:PO:0000013	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0009005	PO:PO:0009006	PO:PO:0009025
PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR43768
PANTHER:PTHR43768:SF1	UniProt:Q8GWG2	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	Symbol:TPPH
InterPro:Trehalose_PPase	UniParc:UPI000000C6A6	:	:	:	:

Description

TPPHProbable trehalose-phosphate phosphatase H [Source:UniProtKB/Swiss-Prot;Acc:Q8GWG2]

Coordinates

chr4:-:18448865..18451305

Molecular Weight (calculated)

40001.1 Da

IEP (calculated)

7.826

GRAVY (calculated)

-0.450

Length

349 amino acids

Sequence
(BLAST)

001: MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK SLLKQSSWLT EHPSALDMFE EILHLSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.