Factsheet for Bra033634.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70318	Canola	mitochondrion	61.73	98.28
Bra011835.1-P	Field mustard	cytosol	85.18	91.59
Bra010658.1-P	Field mustard	cytosol	83.02	89.28
AT4G39770.1	Thale cress	cytosol	83.83	89.11
Bra030256.1-P	Field mustard	cytosol	68.19	74.85
PGSC0003DMT400056161	Potato	cytosol	42.32	73.36
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	60.11	70.35
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	50.67	67.63
Solyc05g051880.2.1	Tomato	plastid	48.52	64.29
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	63.88	63.54
PGSC0003DMT400053144	Potato	plastid	63.07	60.62
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	45.55	60.36
Bra024359.1-P	Field mustard	plastid	53.91	59.52
Bra009057.1-P	Field mustard	plastid	57.95	57.8
Bra031879.1-P	Field mustard	plastid	59.03	57.78
GSMUA_AchrUn_...	Banana	peroxisome	56.33	56.03
GSMUA_Achr6P30350_001	Banana	plastid	53.64	55.59
GSMUA_Achr10P...	Banana	plastid	54.72	54.86
GSMUA_Achr10P...	Banana	plastid	59.03	54.21
Bra015631.1-P	Field mustard	plastid	54.72	53.7
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	53.37	52.8
Bra008344.1-P	Field mustard	plastid	53.37	52.52
Bra013628.1-P	Field mustard	cytosol	45.01	52.02
Bra019370.1-P	Field mustard	nucleus	46.63	47.79
Bra022549.1-P	Field mustard	cytosol, plastid	46.9	45.91
Bra028254.1-P	Field mustard	plastid	46.9	45.55
OQU89414	Sorghum	cytosol	17.79	39.05
Bra034400.1-P	Field mustard	plastid	23.18	33.08

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EnsemblPlantsGene:Bra033634	EnsemblPlants:Bra033634.1	EnsemblPlants:Bra033634.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M4EXU5	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF1	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI000253F825

Description

AT4G39770 (E=2e-182) | trehalose-6-phosphate phosphatase, putative

Coordinates

chrA06:+:25890459..25893157

Molecular Weight (calculated)

42343.0 Da

IEP (calculated)

8.189

GRAVY (calculated)

-0.476

Length

371 amino acids

Sequence
(BLAST)

001: MGGVPVNERG PRGGCWERCN AKINLTIVRF IEENTKPVKN ETGDKSKTDA TTVKTKVLQD LIINNGGGLI NSWVDSMRAC SPTHLKSLMK QSSWLTEHPS
101: ALDMFEEILH VSEGKQIVMF LDYDGTLSPI VDDPDRAFMS KKMRRTVRKL ANCFPTAIIS GRCREKVYNF VKLTELYYAG SHGMDIKGPE QGSKYKDDKS
201: LLCQPATEFL PMIDEVYQKL VEKTNLTPGA NIENNKFCVS VHFRRVDEKN WSDLANQVRS VMKDYPELRL TQGRKVLEIR PIIKWDKGKA LEFLLESLGY
301: ANCTDVFPLY IGDDRTDEDA FKILRERRQG LGILVSKIPK ETNAFYSLQE PDEVMDFLQR LVEWKQLRSG A

Best Arabidopsis Sequence Match ( AT4G39770.1 )
(BLAST)

001: MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK SLLKQSSWLT EHPSALDMFE EILHLSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA

Arabidopsis Description

TPPHProbable trehalose-phosphate phosphatase H [Source:UniProtKB/Swiss-Prot;Acc:Q8GWG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.