Factsheet for Bra013628.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79165	Canola	plastid	100.0	85.6
Bra019370.1-P	Field mustard	nucleus	93.77	83.15
AT4G22590.1	Thale cress	plastid	91.9	78.25
Solyc06g060600.1.1	Tomato	cytosol	67.29	67.92
PGSC0003DMT400035869	Potato	cytosol, nucleus, peroxisome	66.04	61.45
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	71.96	58.78
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	71.65	58.52
KRH04085	Soybean	nucleus, plastid	65.73	58.29
GSMUA_Achr2P18640_001	Banana	cytosol	59.81	57.83
Solyc08g079060.2.1	Tomato	plastid	68.54	56.99
PGSC0003DMT400012219	Potato	plastid	67.29	56.25
GSMUA_Achr4P24650_001	Banana	cytosol	61.68	54.85
Bra022549.1-P	Field mustard	cytosol, plastid	64.49	54.62
GSMUA_Achr1P01710_001	Banana	plastid	66.98	54.29
GSMUA_Achr5P13510_001	Banana	plastid	66.04	53.54
GSMUA_Achr5P15280_001	Banana	plastid	65.42	53.03
GSMUA_Achr5P19860_001	Banana	plastid	62.31	52.63
Bra028254.1-P	Field mustard	plastid	61.37	51.57
Bra010658.1-P	Field mustard	cytosol	52.96	49.28
Bra030256.1-P	Field mustard	cytosol	51.71	49.11
VIT_11s0037g00720.t01	Wine grape	nucleus	16.82	48.65
Bra011835.1-P	Field mustard	cytosol	51.4	47.83
Bra033634.1-P	Field mustard	cytosol	52.02	45.01
Bra008344.1-P	Field mustard	plastid	52.65	44.83
Bra015631.1-P	Field mustard	plastid	52.02	44.18
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	37.38	42.86
Bra031879.1-P	Field mustard	plastid	49.22	41.69
Bra024359.1-P	Field mustard	plastid	43.61	41.67
Bra009057.1-P	Field mustard	plastid	47.66	41.13
Bra034400.1-P	Field mustard	plastid	24.61	30.38

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	EnsemblPlantsGene:Bra013628	EnsemblPlants:Bra013628.1	EnsemblPlants:Bra013628.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M4DAW8	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF17	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002545743

Description

AT4G22590 (E=5e-171) | trehalose-6-phosphate phosphatase, putative

Coordinates

chrA01:-:6709099..6710614

Molecular Weight (calculated)

36428.6 Da

IEP (calculated)

6.643

GRAVY (calculated)

-0.400

Length

321 amino acids

Sequence
(BLAST)

001: MISSSPPRKR LVKDFNIEIA PEDDFAQRAW MLKYPSAITS FGHIAAQAKD KKIAVFLDYD GTLSPIVDDP DRAIMSDAMR AAVKDVAKYF PTAIISGRSR
101: DKVYELVGLT ELYYAGSHGM DIMTPANVNG SPENPNCIKS TDQQGEEVNL FQPAKEFIPV IEEVYKNLVE LTKSIKGAKV ENHKFCASVH YRNVDKEDWL
201: IVAQRVHDHL KQYPRLRLTH GRKVLEVRPV IEWNKGKAVE FLLESLGLSN DDDFLPIFIG DDKTDEDAFK VLREKEQGFG ILVSSVPKES NAFYSLRDPS
301: EVKKFLKTLV KWRKMEDSTS I

Best Arabidopsis Sequence Match ( AT4G22590.1 )
(BLAST)

001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF

Arabidopsis Description

TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.