Factsheet for GSMUA_Achr2P18640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 2
vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94101	Canola	cytosol	21.39	70.3
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	50.3	60.07
Bra013628.1-P	Field mustard	cytosol	57.83	59.81
GSMUA_Achr5P19860_001	Banana	plastid	67.47	58.95
Solyc06g060600.1.1	Tomato	cytosol	54.22	56.6
Bra019370.1-P	Field mustard	nucleus	60.24	55.25
CDX94103	Canola	nucleus	59.94	54.97
CDX98760	Canola	nucleus	59.94	54.97
GSMUA_Achr1P01710_001	Banana	plastid	65.36	54.8
GSMUA_Achr5P13510_001	Banana	plastid	65.36	54.8
GSMUA_Achr4P24650_001	Banana	cytosol	58.13	53.46
AT4G22590.1	Thale cress	plastid	60.54	53.32
GSMUA_Achr5P15280_001	Banana	plastid	63.55	53.28
AT4G12430.1	Thale cress	plastid	58.43	52.72
CDX82953	Canola	plastid	59.34	52.53
CDX79165	Canola	plastid	59.04	52.27
KRH04085	Soybean	nucleus, plastid	56.93	52.21
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	60.54	51.15
PGSC0003DMT400035869	Potato	cytosol, nucleus, peroxisome	53.01	51.01
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	59.94	50.64
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	48.19	48.19
Solyc08g079060.2.1	Tomato	plastid	55.12	47.41
CDX98758	Canola	cytosol, nucleus, peroxisome	21.39	47.33
GSMUA_Achr10P...	Banana	plastid	52.41	47.03
PGSC0003DMT400012219	Potato	plastid	54.22	46.88
GSMUA_Achr6P30350_001	Banana	plastid	48.8	45.25
GSMUA_Achr10P...	Banana	cytosol, plastid	46.08	45.0
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	47.59	44.76
GSMUA_Achr2P14790_001	Banana	cytosol	50.0	44.62
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	50.0	44.27
GSMUA_Achr7P11700_001	Banana	plastid	50.9	44.01
GSMUA_Achr4P24170_001	Banana	cytosol	50.6	43.75
GSMUA_AchrUn_...	Banana	peroxisome	48.49	43.16
GSMUA_Achr10P...	Banana	plastid	51.81	42.57
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	46.69	39.85
VIT_11s0037g00720.t01	Wine grape	nucleus	13.25	39.64
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	25.3	37.5

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr2G18640_001	EnsemblPlants:GSMUA_Achr2P18640_001	EnsemblPlants:GSMUA_Achr2T18640_001	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0S955	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF6
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002965EA7	:

Description

Putative Trehalose-phosphate phosphatase [Source:GMGC_GENE;Acc:GSMUA_Achr2G18640_001]

Coordinates

chr2:+:18993573..18996192

Molecular Weight (calculated)

37492.1 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.190

Length

332 amino acids

Sequence
(BLAST)

001: MCLLPVCTHQ HYPKAKEYLL NMDVISEPSI DETNEAYCTW MMRHPSALTS FEQILSSIRC KKIALFLDYD GTLSPIVDNP DFAIMSNEMR AVVKSASKYF
101: PTAIISGRSC EKVYKFVKLT ELYYAGSHGM DIMGPTRKNN FGDGHANYTV KNDELGNGVH LFQAPSEFLP IINEVCSSLV DITEDILGAK VEYNKYCVSV
201: HYRLVDEKLW PEVARRVLSL VDGYPRLRVT HGRKVLEIRP VIDWNKGKAV EFLLKSLGLS NRDDVLAIHM GDDKTDEDAF KVLRDSNLGF GILVSSVPKE
301: TNAFYSLRDP SEVMEFLKSL VKWKEDSATA AP

Best Arabidopsis Sequence Match ( AT4G22590.1 )
(BLAST)

001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF

Arabidopsis Description

TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.