Factsheet for Solyc06g060600.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035869	Potato	cytosol, nucleus, peroxisome	92.77	85.51
Bra013628.1-P	Field mustard	cytosol	67.92	67.29
Solyc08g079060.2.1	Tomato	plastid	79.25	65.28
CDX94101	Canola	cytosol	20.13	63.37
AT4G12430.1	Thale cress	plastid	69.81	60.33
Bra019370.1-P	Field mustard	nucleus	67.61	59.39
CDX94103	Canola	nucleus	67.61	59.39
CDX98760	Canola	nucleus	67.61	59.39
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	71.7	58.02
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	71.38	57.76
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	57.55	57.73
CDX79165	Canola	plastid	67.92	57.6
CDX82953	Canola	plastid	67.92	57.6
Solyc03g083960.2.1	Tomato	plastid	66.35	57.49
KRH04085	Soybean	nucleus, plastid	65.41	57.46
AT4G22590.1	Thale cress	plastid	67.61	57.03
GSMUA_Achr2P18640_001	Banana	cytosol	56.6	54.22
GSMUA_Achr4P24650_001	Banana	cytosol	59.43	52.35
Solyc05g051880.2.1	Tomato	plastid	45.28	51.43
VIT_11s0037g00720.t01	Wine grape	nucleus	17.92	51.35
GSMUA_Achr5P13510_001	Banana	plastid	63.52	51.01
GSMUA_Achr5P15280_001	Banana	plastid	63.21	50.76
GSMUA_Achr5P19860_001	Banana	plastid	60.38	50.53
GSMUA_Achr1P01710_001	Banana	plastid	62.89	50.51
Solyc04g072920.2.1	Tomato	extracellular	56.6	49.32
Solyc03g007290.2.1	Tomato	cytosol, mitochondrion, nucleus	50.31	47.62
Solyc04g082550.1.1	Tomato	cytosol	43.08	46.76
CDX98758	Canola	cytosol, nucleus, peroxisome	20.13	42.67

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
UniProt:K4C6P0	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF6	SUPFAM:SSF56784	EnsemblPlantsGene:Solyc06g060600.1
EnsemblPlants:Solyc06g060600.1.1	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002766378	SEG:seg

Description

Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:K4C6P0]

Coordinates

chr6:-:38600897..38602858

Molecular Weight (calculated)

35927.0 Da

IEP (calculated)

6.958

GRAVY (calculated)

-0.356

Length

318 amino acids

Sequence
(BLAST)

001: MKSSSPPSKK VQKEAGVEGF SDDAKVGYSS WMFKYPSALK SFQQIVNHAK NKKIVIFLDY DGTLSPIVDD PDRAFISAEM RAVVRDVAKH FPTAIISGRS
101: RDKVYQLVGL TELYYAGSHG MDIMLPIRNE LCTNDSLIKS TDQQGKEVNL FQPAREFLPM IDEVFKTLVD KTKEVVGAKV ENHKFCASVH YRNVDENSWP
201: ILAQCVHDVL KEYPRLRQTH GRKVLEVRPV IDWDKGKAVE FLLESLGFRN SHDVLPIYIG DDRTDEDAFK VLRGRYQGYG ILVSAIPKES NAVFSLGDTS
301: EVKEFLGSLA KTMENQEI

Best Arabidopsis Sequence Match ( AT4G12430.1 )
(BLAST)

001: MDLNSNHKSS VLKDPSPSVN QSRLGVSSRF MMSQWKKPAK LDDVRSNGWL DAMISSSPPR KKLVKDFNVE VAPEDDFAQR AWMVKYPSAI SSFAHIAAQA
101: KKKKIAVFLD YDGTLSPIVD DPDRAIMSDA MRSAVKDVAS YFPTAIISGR SRDKVYQLVG LTELYYAGSH GMDIMTSSDG PNCFKSTDQQ GKEVNLFQPA
201: REFIPVIDEV FRTLVEKMKD IKGAKVENHK FCASVHYRNV DEKDWPIIAQ RVHDHLKQYP RLRLTHGRKV LEVRPVIDWN KGRAVEFLLE SLGLSNKDDL
301: LPIYIGDDTT DEDAFKVLRD GNRGFGILVS SIPKESNAFY SLRDPSEVKK FLKTLVKWAK LEKNSTGF

Arabidopsis Description

TPPFProbable trehalose-phosphate phosphatase F [Source:UniProtKB/Swiss-Prot;Acc:Q9SU39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.