CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013628.1-P	Field mustard	cytosol	85.6	100.0
CDX82953	Canola	plastid	98.67	98.67
CDX94103	Canola	nucleus	89.07	92.27
CDX94101	Canola	cytosol	24.8	92.08
CDX98760	Canola	nucleus	88.8	91.99
AT4G22590.1	Thale cress	plastid	91.47	90.98
Solyc06g060600.1.1	Tomato	cytosol	57.6	67.92
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	70.13	66.92
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	69.87	66.67
PGSC0003DMT400035869	Potato	cytosol, nucleus, peroxisome	60.53	65.8
Solyc08g079060.2.1	Tomato	plastid	66.93	65.03
PGSC0003DMT400012219	Potato	plastid	65.87	64.32
CDX98758	Canola	cytosol, nucleus, peroxisome	25.33	63.33
KRH04085	Soybean	nucleus, plastid	59.47	61.6
GSMUA_Achr1P01710_001	Banana	plastid	64.8	61.36
GSMUA_Achr5P13510_001	Banana	plastid	64.27	60.86
CDY66417	Canola	plastid	61.33	60.69
CDY56658	Canola	plastid	60.8	60.16
GSMUA_Achr5P19860_001	Banana	plastid	60.53	59.74
GSMUA_Achr5P15280_001	Banana	plastid	62.93	59.6
GSMUA_Achr2P18640_001	Banana	cytosol	52.27	59.04
CDY70318	Canola	mitochondrion	36.0	57.94
GSMUA_Achr4P24650_001	Banana	cytosol	55.2	57.34
CDY00477	Canola	plastid	57.87	56.22
CDX99919	Canola	plastid	57.6	55.81
CDX90831	Canola	mitochondrion	10.67	55.56
CDY26849	Canola	mitochondrion	34.13	54.94
CDY15842	Canola	cytosol	45.87	50.89
CDY63411	Canola	cytosol	45.6	50.44
CDX90361	Canola	cytosol, peroxisome, plastid	47.47	50.28
VIT_11s0037g00720.t01	Wine grape	nucleus	14.4	48.65
CDY39454	Canola	cytosol	30.93	48.13
CDY14635	Canola	plastid	46.93	46.68
CDY26848	Canola	plastid	46.93	46.44
CDY22393	Canola	cytosol	45.87	46.36
CDX88416	Canola	plastid	46.13	45.77
CDX87477	Canola	plastid	46.13	45.77
CDX72676	Canola	mitochondrion	46.13	45.41
CDY08815	Canola	plastid	43.47	44.9
CDY31283	Canola	plastid	44.53	44.53
CDY37091	Canola	plastid	25.07	36.15
CDY14544	Canola	endoplasmic reticulum, plasma membrane	43.47	35.9

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	GO:A0A078CQQ1	EnsemblPlants:CDX79165	ProteinID:CDX79165	ProteinID:CDX79165.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00131730001
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF17	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0004EE02E3

Description

BnaA01g12320D

Coordinates

chrLK031816:-:2105900..2107750

Molecular Weight (calculated)

42414.8 Da

IEP (calculated)

8.189

GRAVY (calculated)

-0.418

Length

375 amino acids

Sequence
(BLAST)

001: MDININKTTP VLSEPTTPVS KSRLGSSFPS GRFMSLRKKI PKLDDVRSNG WLEAMISSSP PRKRLVKDFN IEIAPEDDFA QRAWMLKYPS AITSFGHIAA
101: QAKDKKIAVF LDYDGTLSPI VDDPDRAIMS DAMRAAVKDV AKYFPTAIIS GRSRDKVYEL VGLTELYYAG SHGMDIMTPA NVNGSPENPN CIKSTDQQGE
201: EVNLFQPAKE FIPVIEEVYK NLVELTKSIK GAKVENHKFC ASVHYRNVDK EDWLIVAQRV HDHLKQYPRL RLTHGRKVLE VRPVIEWNKG KAVEFLLESL
301: GLSNDDDFLP IFIGDDKTDE DAFKVLREKE QGFGILVSSV PKESNAFYSL RDPSEVKKFL KTLVKWRKME DSTSI

Best Arabidopsis Sequence Match ( AT4G22590.1 )
(BLAST)

001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF

Arabidopsis Description

TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.