Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98758 | Canola | cytosol, nucleus, peroxisome | 94.06 | 63.33 |
| Bra019370.1-P | Field mustard | nucleus | 94.06 | 26.24 |
| CDX94103 | Canola | nucleus | 94.06 | 26.24 |
| CDX98760 | Canola | nucleus | 93.07 | 25.97 |
| CDY26849 | Canola | mitochondrion | 59.41 | 25.75 |
| CDY70318 | Canola | mitochondrion | 58.42 | 25.32 |
| CDX79165 | Canola | plastid | 92.08 | 24.8 |
| CDX82953 | Canola | plastid | 92.08 | 24.8 |
| AT4G22590.1 | Thale cress | plastid | 88.12 | 23.61 |
| CDX90831 | Canola | mitochondrion | 15.84 | 22.22 |
| GSMUA_Achr2P18640_001 | Banana | cytosol | 70.3 | 21.39 |
| Solyc06g060600.1.1 | Tomato | cytosol | 63.37 | 20.13 |
| GSMUA_Achr4P24650_001 | Banana | cytosol | 69.31 | 19.39 |
| KRH04085 | Soybean | nucleus, plastid | 69.31 | 19.34 |
| GSMUA_Achr5P15280_001 | Banana | plastid | 71.29 | 18.18 |
| VIT_02s0154g00110.t01 | Wine grape | nucleus, peroxisome, plastid | 70.3 | 18.07 |
| GSMUA_Achr1P01710_001 | Banana | plastid | 70.3 | 17.93 |
| GSMUA_Achr5P19860_001 | Banana | plastid | 67.33 | 17.89 |
| PGSC0003DMT400035869 | Potato | cytosol, nucleus, peroxisome | 60.4 | 17.68 |
| GSMUA_Achr5P13510_001 | Banana | plastid | 69.31 | 17.68 |
| VIT_00s0233g00030.t01 | Wine grape | nucleus, peroxisome, plastid | 68.32 | 17.56 |
| Solyc08g079060.2.1 | Tomato | plastid | 65.35 | 17.1 |
| CDY56658 | Canola | plastid | 63.37 | 16.89 |
| CDY66417 | Canola | plastid | 63.37 | 16.89 |
| PGSC0003DMT400012219 | Potato | plastid | 63.37 | 16.67 |
| CDX90361 | Canola | cytosol, peroxisome, plastid | 58.42 | 16.67 |
| CDY00477 | Canola | plastid | 62.38 | 16.32 |
| CDX99919 | Canola | plastid | 62.38 | 16.28 |
| CDY14635 | Canola | plastid | 59.41 | 15.92 |
| CDY22393 | Canola | cytosol | 58.42 | 15.9 |
| CDX87477 | Canola | plastid | 59.41 | 15.87 |
| CDY26848 | Canola | plastid | 59.41 | 15.83 |
| CDX88416 | Canola | plastid | 58.42 | 15.61 |
| CDX72676 | Canola | mitochondrion | 58.42 | 15.49 |
| CDY15842 | Canola | cytosol | 50.49 | 15.09 |
| CDY63411 | Canola | cytosol | 50.49 | 15.04 |
| CDY31283 | Canola | plastid | 52.48 | 14.13 |
| CDY08815 | Canola | plastid | 48.51 | 13.5 |
| CDY14544 | Canola | endoplasmic reticulum, plasma membrane | 48.51 | 10.79 |
| CDY37091 | Canola | plastid | 16.83 | 6.54 |
| VIT_11s0037g00720.t01 | Wine grape | nucleus | 6.93 | 6.31 |
| CDY39454 | Canola | cytosol | 1.98 | 0.83 |
Protein Annotations
| Gene3D:3.40.50.1000 | MapMan:35.1 | GO:A0A078DXZ8 | EnsemblPlants:CDX94101 | ProteinID:CDX94101 | ProteinID:CDX94101.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005992 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00157011001 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 |
| PFAM:PF02358 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF17 | SUPFAM:SSF56784 | InterPro:Trehalose_PPase | UniParc:UPI0004EF4DCE |
Description
BnaC07g37350D
Coordinates
chrLK031879:-:696204..696694
Molecular Weight (calculated)
11591.0 Da
IEP (calculated)
7.535
GRAVY (calculated)
-0.381
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQVLEVRPV IEWNKGKAVE FLLESLGLSK NDDFLPIFIG DDKTDEDAFK VLREKKQGFG ILVSSVPKES NAFYSLKDPS EVKKFLKTLV KWRKMEDSTS
101: H
101: H
001: MDLNSNHKSS VLKDPSPSVN QSRLGVSSRF MMSQWKKPAK LDDVRSNGWL DAMISSSPPR KKLVKDFNVE VAPEDDFAQR AWMVKYPSAI SSFAHIAAQA
101: KKKKIAVFLD YDGTLSPIVD DPDRAIMSDA MRSAVKDVAS YFPTAIISGR SRDKVYQLVG LTELYYAGSH GMDIMTSSDG PNCFKSTDQQ GKEVNLFQPA
201: REFIPVIDEV FRTLVEKMKD IKGAKVENHK FCASVHYRNV DEKDWPIIAQ RVHDHLKQYP RLRLTHGRKV LEVRPVIDWN KGRAVEFLLE SLGLSNKDDL
301: LPIYIGDDTT DEDAFKVLRD GNRGFGILVS SIPKESNAFY SLRDPSEVKK FLKTLVKWAK LEKNSTGF
101: KKKKIAVFLD YDGTLSPIVD DPDRAIMSDA MRSAVKDVAS YFPTAIISGR SRDKVYQLVG LTELYYAGSH GMDIMTSSDG PNCFKSTDQQ GKEVNLFQPA
201: REFIPVIDEV FRTLVEKMKD IKGAKVENHK FCASVHYRNV DEKDWPIIAQ RVHDHLKQYP RLRLTHGRKV LEVRPVIDWN KGRAVEFLLE SLGLSNKDDL
301: LPIYIGDDTT DEDAFKVLRD GNRGFGILVS SIPKESNAFY SLRDPSEVKK FLKTLVKWAK LEKNSTGF
Arabidopsis Description
TPPFProbable trehalose-phosphate phosphatase F [Source:UniProtKB/Swiss-Prot;Acc:Q9SU39]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.