Factsheet for Solyc08g079060.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012219	Potato	plastid	97.41	97.92
Solyc06g060600.1.1	Tomato	cytosol	65.28	79.25
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	72.8	71.5
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	72.54	71.25
AT4G12430.1	Thale cress	plastid	66.84	70.11
Solyc03g083960.2.1	Tomato	plastid	66.32	69.75
Bra013628.1-P	Field mustard	cytosol	56.99	68.54
CDX98760	Canola	nucleus	64.25	68.51
CDX94103	Canola	nucleus	64.25	68.51
Bra019370.1-P	Field mustard	nucleus	63.99	68.23
CDX82953	Canola	plastid	65.54	67.47
CDX79165	Canola	plastid	65.03	66.93
AT4G22590.1	Thale cress	plastid	64.77	66.31
CDX94101	Canola	cytosol	17.1	65.35
KRH04085	Soybean	nucleus, plastid	60.1	64.09
GSMUA_Achr1P01710_001	Banana	plastid	62.95	61.36
GSMUA_Achr5P13510_001	Banana	plastid	61.66	60.1
GSMUA_Achr5P19860_001	Banana	plastid	58.81	59.74
GSMUA_Achr5P15280_001	Banana	plastid	61.14	59.6
GSMUA_Achr4P24650_001	Banana	cytosol	53.11	56.79
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	45.85	55.84
GSMUA_Achr2P18640_001	Banana	cytosol	47.41	55.12
Solyc05g051880.2.1	Tomato	plastid	38.86	53.57
Solyc04g072920.2.1	Tomato	extracellular	49.22	52.05
VIT_11s0037g00720.t01	Wine grape	nucleus	14.77	51.35
Solyc03g007290.2.1	Tomato	cytosol, mitochondrion, nucleus	41.19	47.32
Solyc04g082550.1.1	Tomato	cytosol	35.23	46.42
CDX98758	Canola	cytosol, nucleus, peroxisome	16.84	43.33

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:K4CNR5
PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF6	SUPFAM:SSF56784	EnsemblPlantsGene:Solyc08g079060.2	EnsemblPlants:Solyc08g079060.2.1
TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI000276AF10	:	:

Description

Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:K4CNR5]

Coordinates

chr8:+:62710550..62713243

Molecular Weight (calculated)

43633.0 Da

IEP (calculated)

7.568

GRAVY (calculated)

-0.451

Length

386 amino acids

Sequence
(BLAST)

001: MDLNSAQASP VLTDPSPLNK SRLGIHSSLF PYSQSGPSFS TSVLSIPRKK PAKLDDVRSN GWLDAMKSSS PPRKKILKDV NIDVSSDDAD VTYLSWMMKY
101: PSALNCFQQI MRQARNKQIV IFLDYDGTLS PIVDDPDRAF MSNEMRSVVS NVAKYFPTAI ISGRRRDKVY ELVGLTELYY AGSHGMDIML PIKNTSSAND
201: SNCIKDTDQQ GKEVNLFQPA RKFLSMIDEV FKTLVEKTKD IKGAKVEHHK FCASVHYRNV DENSWSLIAQ YVHDVLKDYP RLRLTHGRKV LEVRPDIDWD
301: KGKAVEFLLE SLGFSNPRDV LPIYIGDDRT DEDAFKVLRG KYKGYGILVS TTPKESNASF SLKDTSQVKN FLECLAKTME VEDDDI

Best Arabidopsis Sequence Match ( AT4G12430.1 )
(BLAST)

001: MDLNSNHKSS VLKDPSPSVN QSRLGVSSRF MMSQWKKPAK LDDVRSNGWL DAMISSSPPR KKLVKDFNVE VAPEDDFAQR AWMVKYPSAI SSFAHIAAQA
101: KKKKIAVFLD YDGTLSPIVD DPDRAIMSDA MRSAVKDVAS YFPTAIISGR SRDKVYQLVG LTELYYAGSH GMDIMTSSDG PNCFKSTDQQ GKEVNLFQPA
201: REFIPVIDEV FRTLVEKMKD IKGAKVENHK FCASVHYRNV DEKDWPIIAQ RVHDHLKQYP RLRLTHGRKV LEVRPVIDWN KGRAVEFLLE SLGLSNKDDL
301: LPIYIGDDTT DEDAFKVLRD GNRGFGILVS SIPKESNAFY SLRDPSEVKK FLKTLVKWAK LEKNSTGF

Arabidopsis Description

TPPFProbable trehalose-phosphate phosphatase F [Source:UniProtKB/Swiss-Prot;Acc:Q9SU39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.