Factsheet for Solyc05g051880.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056161	Potato	cytosol	56.79	74.3
KRH26019	Soybean	cytosol	23.93	70.53
CDY70318	Canola	mitochondrion	57.5	69.1
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	72.5	64.04
Bra030256.1-P	Field mustard	cytosol	64.29	53.25
CDY15842	Canola	cytosol	64.29	53.25
Bra011835.1-P	Field mustard	cytosol	65.36	53.04
CDY63411	Canola	cytosol	63.93	52.8
Bra010658.1-P	Field mustard	cytosol	65.0	52.75
AT4G39770.1	Thale cress	cytosol	65.71	52.72
KRH31279	Soybean	plastid	67.86	52.34
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	51.79	52.16
KRH43210	Soybean	cytosol, nucleus, peroxisome	67.86	51.91
KRG97593	Soybean	plastid	67.5	51.78
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	68.93	51.74
CDX90361	Canola	cytosol, peroxisome, plastid	65.0	51.41
AT2G22190.1	Thale cress	cytosol, nucleus, peroxisome	64.29	50.85
KRH59366	Soybean	plastid	65.71	50.83
CDY22393	Canola	cytosol	65.0	49.06
CDY08815	Canola	plastid	63.57	49.04
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	48.93	48.93
AT5G65140.1	Thale cress	plastid	64.64	48.92
Bra033634.1-P	Field mustard	cytosol	64.29	48.52
Solyc04g072920.2.1	Tomato	extracellular	63.21	48.49
GSMUA_Achr6P30350_001	Banana	plastid	61.79	48.32
GSMUA_AchrUn_...	Banana	peroxisome	63.93	47.99
Bra024359.1-P	Field mustard	plastid	57.5	47.92
AT5G10100.1	Thale cress	plastid	64.64	47.63
Bra009057.1-P	Field mustard	plastid	63.21	47.58
CDY31283	Canola	plastid	63.57	47.47
CDX72676	Canola	mitochondrion	64.29	47.24
Bra031879.1-P	Field mustard	plastid	63.93	47.23
CDY39454	Canola	cytosol	39.29	45.64
Solyc06g060600.1.1	Tomato	cytosol	51.43	45.28
GSMUA_Achr10P...	Banana	plastid	59.64	45.14
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	59.29	44.27
GSMUA_Achr10P...	Banana	plastid	63.21	43.81
Solyc03g083960.2.1	Tomato	plastid	56.07	42.78
CDY14544	Canola	endoplasmic reticulum, plasma membrane	63.57	39.21
OQU89414	Sorghum	cytosol	23.57	39.05
Solyc08g079060.2.1	Tomato	plastid	53.57	38.86
Solyc04g082550.1.1	Tomato	cytosol	39.29	37.54
Solyc03g007290.2.1	Tomato	cytosol, mitochondrion, nucleus	42.86	35.71
KRH75558	Soybean	cytosol, extracellular, peroxisome	6.43	27.27
KRH38605	Soybean	cytosol	41.07	22.24

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
UniProt:K4C1L9	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF1	SUPFAM:SSF56784	EnsemblPlantsGene:Solyc05g051880.2
EnsemblPlants:Solyc05g051880.2.1	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002765914	SEG:seg

Description

Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:K4C1L9]

Coordinates

chr5:-:62283483..62288578

Molecular Weight (calculated)

32077.1 Da

IEP (calculated)

10.137

GRAVY (calculated)

-0.482

Length

280 amino acids

Sequence
(BLAST)

001: MVSPPPPPPP RGSCINNISR KTLVEINGDP KIMKSWIDSM RASSPTHHMS TTLYEDKTSW MMRGTVRKLA RYFPTAIVSG RCRDKVYNFV QLSELYYAGS
101: HGMDIKGPSK GSKYSKKGTQ AILFQPASKF LPMIIEVYKE LLDKTKSIEG VRVENNKFCV SVHFRCVDEK KWGELSQEVR LVLKEYPKLK LCQGRKVLEI
201: RPIIKWDKGK ALQFLLQSLG YAKCNDVFPI YIGDDRTDED AFKVLRERRQ GLGILVSKTP KETHASYSLQ EPSEVRIFKH

Best Arabidopsis Sequence Match ( AT4G39770.1 )
(BLAST)

001: MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK SLLKQSSWLT EHPSALDMFE EILHLSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA

Arabidopsis Description

TPPHProbable trehalose-phosphate phosphatase H [Source:UniProtKB/Swiss-Prot;Acc:Q8GWG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.