Factsheet for Bra006047.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome, plastid

Predictor Summary:

nucleus 2
peroxisome 1
vacuole 1
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75558	Soybean	cytosol, extracellular, peroxisome	17.5	74.24
Bra009057.1-P	Field mustard	plastid	84.29	63.44
Bra024359.1-P	Field mustard	plastid	76.07	63.39
AT5G10100.1	Thale cress	plastid	85.71	63.16
PGSC0003DMT400056161	Potato	cytosol	46.79	61.22
KRH26019	Soybean	cytosol	20.71	61.05
Bra031879.1-P	Field mustard	plastid	76.43	56.46
KRH31279	Soybean	plastid	68.57	52.89
KRH43210	Soybean	cytosol, nucleus, peroxisome	68.21	52.19
KRG97593	Soybean	plastid	67.86	52.05
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	58.93	52.05
KRH59366	Soybean	plastid	66.07	51.1
Bra010658.1-P	Field mustard	cytosol	62.14	50.43
PGSC0003DMT400053144	Potato	plastid	69.29	50.26
Bra030256.1-P	Field mustard	cytosol	60.36	50.0
Bra011835.1-P	Field mustard	cytosol	61.43	49.86
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	66.07	49.6
Solyc05g051880.2.1	Tomato	plastid	48.93	48.93
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	47.5	47.84
GSMUA_Achr6P30350_001	Banana	plastid	60.36	47.21
GSMUA_AchrUn_...	Banana	peroxisome	61.07	45.84
Bra033634.1-P	Field mustard	cytosol	60.36	45.55
GSMUA_Achr10P...	Banana	plastid	62.14	43.07
GSMUA_Achr10P...	Banana	plastid	56.79	42.97
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	55.36	41.33
Bra008344.1-P	Field mustard	plastid	55.0	40.85
Bra015631.1-P	Field mustard	plastid	55.0	40.74
Bra013628.1-P	Field mustard	cytosol	42.86	37.38
Bra019370.1-P	Field mustard	nucleus	45.71	35.36
Bra022549.1-P	Field mustard	cytosol, plastid	47.14	34.83
Bra028254.1-P	Field mustard	plastid	47.5	34.82
Bra034400.1-P	Field mustard	plastid	31.43	33.85
KRH38605	Soybean	cytosol	44.29	23.98
OQU89414	Sorghum	cytosol	12.14	20.12

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	EnsemblPlantsGene:Bra006047	EnsemblPlants:Bra006047.1	EnsemblPlants:Bra006047.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	UniProt:M4CPA9	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF18
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI000253F838	SEG:seg

Description

AT5G10100 (E=2e-109) | trehalose-6-phosphate phosphatase, putative

Coordinates

chrA03:+:1748128..1749637

Molecular Weight (calculated)

31649.4 Da

IEP (calculated)

9.990

GRAVY (calculated)

-0.303

Length

280 amino acids

Sequence
(BLAST)

001: MSESQNVVVS EAARSIIPNN SSAPPGFISI SKKKLLKNLE IINDGERINA WVDSMRASSP THPKSLPSSI SSEQQLSSWI MQHPSALEMF EKITEASGGK
101: QIVIFLDYDG TLSPIVDDPD RAFMSSKMRR TVKKLAKCFP TAIVTGRCLD KVYSFVKLAE LYYAGSHGMD IKGPAKGFSR HKRVKQSLLY QPASDYLPMI
201: DEVYRQLLEK TKSTPGVIVE NNKFCASVHF RCVDEKVRSV LKEYPRLKLN QGRKVFEIRP MIEWDKGKAL EFFFFLLKSS

Best Arabidopsis Sequence Match ( AT5G10100.4 )
(BLAST)

001: MVRFVVEKPQ IMSASQNIVV SETTMSSIIP NNNNNNNNSS SQKLPPCLIS ISKKKLLKNI DIINGGGQRI NAWVDSMRAS SPTHLKSLPS SISTQQQLNS
101: WIMQHPSALE KFEQIMEASR GKQIVMFLDY DGTLSPIVDD PDKAFMSSKM RRTVKKLAKC FPTAIVTGRC IDKVYNFVKL AELYYAGSHG MDIKGPAKGF
201: SRHKRVKQSL LYQPANDYLP MIDEVYRQLL EKTKSTPGAK VENHKFCASV HFRCVDEKKW SELVLQVRSV LKKFPTLQLT QGRKVFEIRP MIEWDKGKAL
301: EFLLESLDAF KMLRDRGEGF GILVSKFPKD TDASYSLQDP SEVMDFLRRL VEWKQMQPRM

Arabidopsis Description

TPPITrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A2H1ZE62]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.