Factsheet for GSMUA_Achr4P01810_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
peroxisome 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid, vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	56.8	76.62
GSMUA_Achr10P...	Banana	plastid	74.13	75.14
PGSC0003DMT400056161	Potato	cytosol	39.47	69.16
KRH26019	Soybean	cytosol	17.07	67.37
CDY70318	Canola	mitochondrion	40.53	65.24
GSMUA_AchrUn_...	Banana	peroxisome	63.73	64.08
GSMUA_Achr6P30350_001	Banana	plastid	61.07	63.97
KRH75558	Soybean	cytosol, extracellular, peroxisome	11.2	63.64
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	53.07	62.78
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	54.93	62.05
KRH43210	Soybean	cytosol, nucleus, peroxisome	59.2	60.66
GSMUA_Achr10P...	Banana	plastid	65.07	60.4
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	60.0	60.32
GSMUA_Achr10P...	Banana	cytosol, plastid	54.67	60.29
KRH59366	Soybean	plastid	57.33	59.39
Solyc05g051880.2.1	Tomato	plastid	44.27	59.29
KRH31279	Soybean	plastid	57.07	58.95
Bra011835.1-P	Field mustard	cytosol	54.13	58.84
Bra010658.1-P	Field mustard	cytosol	54.13	58.84
GSMUA_Achr2P14790_001	Banana	cytosol	58.13	58.6
KRG97593	Soybean	plastid	56.8	58.36
GSMUA_Achr7P11700_001	Banana	plastid	59.73	58.33
GSMUA_Achr4P24170_001	Banana	cytosol	59.73	58.33
CDX90361	Canola	cytosol, peroxisome, plastid	54.4	57.63
AT4G39770.1	Thale cress	cytosol	53.6	57.59
PGSC0003DMT400053144	Potato	plastid	59.2	57.51
CDY39454	Canola	cytosol	36.0	56.02
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	57.87	55.78
AT5G65140.1	Thale cress	plastid	54.93	55.68
AT2G22190.1	Thale cress	cytosol, nucleus, peroxisome	52.53	55.65
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	41.33	55.36
CDY63411	Canola	cytosol	49.6	54.87
AT5G10100.1	Thale cress	plastid	55.47	54.74
CDY15842	Canola	cytosol	49.33	54.73
Bra030256.1-P	Field mustard	cytosol	49.33	54.73
Bra024359.1-P	Field mustard	plastid	48.27	53.87
CDY22393	Canola	cytosol	53.07	53.64
Bra033634.1-P	Field mustard	cytosol	52.8	53.37
CDY08815	Canola	plastid	51.47	53.17
CDY31283	Canola	plastid	52.8	52.8
Bra031879.1-P	Field mustard	plastid	52.27	51.72
Bra009057.1-P	Field mustard	plastid	51.2	51.61
CDX72676	Canola	mitochondrion	52.27	51.44
GSMUA_Achr2P18640_001	Banana	cytosol	44.27	50.0
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	45.6	48.44
GSMUA_Achr4P24650_001	Banana	cytosol	45.6	47.37
GSMUA_Achr1P01710_001	Banana	plastid	49.6	46.97
GSMUA_Achr5P19860_001	Banana	plastid	47.47	46.84
GSMUA_Achr5P13510_001	Banana	plastid	49.33	46.72
GSMUA_Achr5P15280_001	Banana	plastid	49.07	46.46
CDY14544	Canola	endoplasmic reticulum, plasma membrane	51.2	42.29
OQU89414	Sorghum	cytosol	17.07	37.87
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	18.93	31.7
KRH38605	Soybean	cytosol	38.13	27.66

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr4G01810_001	EnsemblPlants:GSMUA_Achr4P01810_001	EnsemblPlants:GSMUA_Achr4T01810_001	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0SK98	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF13
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI00029610F6	SEG:seg

Description

uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G01810_001]

Coordinates

chr4:-:1530032..1532164

Molecular Weight (calculated)

41915.1 Da

IEP (calculated)

9.911

GRAVY (calculated)

-0.165

Length

375 amino acids

Sequence
(BLAST)

001: MTNQNVVVPE ATPAITVAAA AKPPVLFPYP PPRGGGASAA AAIRKKHLSQ VELGESWTNA WLESMKTSSP IHAKVAASAA AVPIIEREQN EHSAWIVRHP
101: SALSKFEQLM KATKGKQIVM FLDYDGTLSP IVDDPDSAFM SDAMRAAVKE VAGCFPTAIV SGRCRSKLFD FVKLTELYYA GSHGMDIEVR KGTKYTKKKK
201: TVLFQPASEF LPMIKKVHKA LSKKTKPIPG AKLENNKFCV SVHFRCVDEK NWRVLLEQVW LVLKEYPMLR ITPGRKVLEI RPIIKWDKGS ALQFLLDSLG
301: FADSKNVLPV YIGDDLTDED AFKVLRDRGR GIGILVSEFP KETNASYFLR RPSEVMEFLL RLVEWKRLSL EDGLE

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.