Factsheet for PGSC0003DMT400056161

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75558	Soybean	cytosol, extracellular, peroxisome	22.43	72.73
KRH26019	Soybean	cytosol	31.31	70.53
Solyc05g051880.2.1	Tomato	plastid	74.3	56.79
CDY70318	Canola	mitochondrion	56.54	51.93
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	64.95	50.0
CDY39454	Canola	cytosol	53.74	47.72
PGSC0003DMT400053144	Potato	plastid	85.51	47.41
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	61.22	46.79
CDY15842	Canola	cytosol	73.83	46.75
Bra030256.1-P	Field mustard	cytosol	73.83	46.75
Bra010658.1-P	Field mustard	cytosol	75.23	46.67
CDY63411	Canola	cytosol	73.83	46.61
Bra024359.1-P	Field mustard	plastid	72.9	46.43
KRH31279	Soybean	plastid	78.04	46.01
KRG97593	Soybean	plastid	78.04	45.75
AT4G39770.1	Thale cress	cytosol	74.3	45.56
Bra011835.1-P	Field mustard	cytosol	73.36	45.51
CDX90361	Canola	cytosol, peroxisome, plastid	75.23	45.48
KRH59366	Soybean	plastid	76.64	45.3
AT2G22190.1	Thale cress	cytosol, nucleus, peroxisome	74.77	45.2
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	78.5	45.04
KRH43210	Soybean	cytosol, nucleus, peroxisome	75.23	43.99
GSMUA_Achr6P30350_001	Banana	plastid	73.36	43.85
CDY22393	Canola	cytosol	74.3	42.86
CDY08815	Canola	plastid	72.43	42.7
GSMUA_AchrUn_...	Banana	peroxisome	74.3	42.63
Bra033634.1-P	Field mustard	cytosol	73.36	42.32
PGSC0003DMT400024511	Potato	peroxisome, plastid	71.96	42.19
AT5G65140.1	Thale cress	plastid	72.9	42.16
Bra009057.1-P	Field mustard	plastid	72.9	41.94
CDX72676	Canola	mitochondrion	73.83	41.47
CDY31283	Canola	plastid	72.43	41.33
Bra031879.1-P	Field mustard	plastid	72.43	40.9
GSMUA_Achr10P...	Banana	plastid	70.09	40.54
AT5G10100.1	Thale cress	plastid	71.96	40.53
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	69.16	39.47
PGSC0003DMT400090449	Potato	cytosol	53.27	38.91
PGSC0003DMT400095474	Potato	cytosol	38.32	38.68
GSMUA_Achr10P...	Banana	plastid	72.43	38.37
PGSC0003DMT400035869	Potato	cytosol, nucleus, peroxisome	61.68	38.26
PGSC0003DMT400035990	Potato	peroxisome, plastid	63.55	35.42
PGSC0003DMT400023513	Potato	cytosol, mitochondrion, plastid	53.74	34.95
PGSC0003DMT400012219	Potato	plastid	61.68	34.38
CDY14544	Canola	endoplasmic reticulum, plasma membrane	71.5	33.7
OQU89414	Sorghum	cytosol	25.7	32.54
KRH38605	Soybean	cytosol	59.35	24.56

Protein Annotations

Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
UniProt:M1BZ27	PFAM:PF02358	EnsemblPlantsGene:PGSC0003DMG400021820	PGSC:PGSC0003DMG400021820	EnsemblPlants:PGSC0003DMT400056161	PANTHER:PTHR43768
PANTHER:PTHR43768:SF1	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI000295230D
SEG:seg	:	:	:	:	:

Description

Trehalose-6-phosphate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400021820]

Coordinates

chr5:-:47129773..47133403

Molecular Weight (calculated)

24442.7 Da

IEP (calculated)

9.270

GRAVY (calculated)

-0.387

Length

214 amino acids

Sequence
(BLAST)

001: MKQVHHPSAV DMFEDIISVS KGKKIVMFLD YDGTLSPIVD DPDQAFMSDD MRGTVRKLAR YFPTAIVSGR CRDKVYNFVQ LAELYYAGSH GMDIKGPSKG
101: SKNSKKVYKE LLDKTKSIEG VRVENNKFCV SVHFRCVDEK KWGELSQQVS LVLKEYPKLK LCQGRKVLEI RPIIKWDKGK ALQFLLQSLG YAKCNDVFPI
201: YIGDDRTDED AFKV

Best Arabidopsis Sequence Match ( AT2G22190.1 )
(BLAST)

001: MVRFIEENIT KMLETKAISN SEVLYVGGDD GDTSPTTKVL HDFQINSGGG LIRSWVDSMR ACSPTRPKSF NSQSCWIKEH PSALNMFEEI LHKSEGKQIV
101: MFLDYDGTLS PIVDDPDRAF MSKKMRNTVR KLAKCFPTAI VSGRCREKVS SFVKLTELYY AGSHGMDIKG PEQGSKYKKE NQSLLCQPAT EFLPVINEVY
201: KKLVENTQSI PGAKVENNKF CASVHFRCVE ENKWSDLAHQ VRSVLKNYPK LMLTQGRKVL EIRPIIKWDK GKALEFLLES LGYDNCTDVF PIYIGDDRTD
301: EDAFKILRDK KQGLGILVSK YAKETNASYS LQEPDEVMVF LERLVEWKQS RCGA

Arabidopsis Description

TPPEProbable trehalose-phosphate phosphatase E [Source:UniProtKB/Swiss-Prot;Acc:Q67X99]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.