Factsheet for PGSC0003DMT400090449

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082550.1.1	Tomato	cytosol	95.9	95.9
PGSC0003DMT400095474	Potato	cytosol	67.92	93.87
VIT_15s0046g01000.t01	Wine grape	cytosol, nucleus, peroxisome	52.56	53.29
PGSC0003DMT400056161	Potato	cytosol	38.91	53.27
KRH06490	Soybean	cytosol	52.22	48.88
PGSC0003DMT400023513	Potato	cytosol, mitochondrion, plastid	54.61	48.63
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	55.63	46.18
PGSC0003DMT400024511	Potato	peroxisome, plastid	51.19	41.1
PGSC0003DMT400035869	Potato	cytosol, nucleus, peroxisome	46.76	39.71
PGSC0003DMT400053144	Potato	plastid	50.51	38.34
PGSC0003DMT400035990	Potato	peroxisome, plastid	50.17	38.28
PGSC0003DMT400012219	Potato	plastid	46.08	35.16

Protein Annotations

EntrezGene:102580818	MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824
GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	UniProt:M1DKE8	PFAM:PF02358	EnsemblPlantsGene:PGSC0003DMG400040020	PGSC:PGSC0003DMG400040020	EnsemblPlants:PGSC0003DMT400090449
PANTHER:PTHR43768	PANTHER:PTHR43768:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase
UniParc:UPI000295C39B	RefSeq:XP_006342252.1	:	:	:	:

Description

Trehalose-6-phosphate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400040020]

Coordinates

chr4:-:71739951..71742465

Molecular Weight (calculated)

33091.8 Da

IEP (calculated)

5.456

GRAVY (calculated)

-0.228

Length

293 amino acids

Sequence
(BLAST)

001: MGLARLSSIE DGNDFSIEYA SWLVEHPCAL EKFEEMMKIA KGKKIVIFLD YDGTLSDIVP NPEEAFMTDK MRMVLGEVAN RFPTAIISGR KRERVQDFVQ
101: LKNVYYAGSH GLDIEAPLDS TNSNEKDNKV VFYQPAIEFL PEKQKILNLL GERTKGIKGV NIEDNKFCIS VHYRHVHTKD FGSVENIISA VLKEHPNFRV
201: STGIKVFEIG PNIVWNKGHA LEYFLENLGF GNSDDVLPIY IGDDRTDEDA FKVLLKRGQG FPIVVTASPK DTKALYSLRE PKEVMEFLLG LVA

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.