Factsheet for GSMUA_Achr6P14300_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	47.31	60.07
PGSC0003DMT400023513	Potato	cytosol, mitochondrion, plastid	53.82	57.75
VIT_15s0046g01000.t01	Wine grape	cytosol, nucleus, peroxisome	46.74	57.09
Solyc03g007290.2.1	Tomato	cytosol, mitochondrion, nucleus	53.54	56.25
VIT_16s0050g02600.t01	Wine grape	mitochondrion	53.82	55.72
PGSC0003DMT400095474	Potato	cytosol	33.43	55.66
PGSC0003DMT400090449	Potato	cytosol	46.18	55.63
Solyc04g082550.1.1	Tomato	cytosol	45.33	54.61
KRH06490	Soybean	cytosol	47.88	53.99
KRH53451	Soybean	golgi, vacuole	51.56	49.59
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	46.46	49.4
GSMUA_Achr10P...	Banana	cytosol, plastid	47.31	49.12
KRH64499	Soybean	golgi, mitochondrion	50.71	48.77
GSMUA_Achr2P18640_001	Banana	cytosol	44.76	47.59
GSMUA_Achr6P30350_001	Banana	plastid	48.16	47.49
GSMUA_Achr10P...	Banana	plastid	48.73	46.49
GSMUA_Achr2P14790_001	Banana	cytosol	48.73	46.24
GSMUA_Achr4P24650_001	Banana	cytosol	47.03	45.98
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	48.44	45.6
GSMUA_AchrUn_...	Banana	peroxisome	47.88	45.31
GSMUA_Achr7P11700_001	Banana	plastid	48.73	44.79
GSMUA_Achr5P15280_001	Banana	plastid	50.14	44.7
GSMUA_Achr4P24170_001	Banana	cytosol	48.44	44.53
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	49.01	44.47
GSMUA_Achr1P01710_001	Banana	plastid	49.58	44.19
GSMUA_Achr5P19860_001	Banana	plastid	47.03	43.68
GSMUA_Achr5P13510_001	Banana	plastid	48.44	43.18
GSMUA_Achr10P...	Banana	plastid	49.29	43.07
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	18.13	28.57

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G14300_001	EnsemblPlants:GSMUA_Achr6P14300_001	EnsemblPlants:GSMUA_Achr6T14300_001	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0T6X8	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF4
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002964D5A	SEG:seg

Description

Putative Trehalose-phosphate phosphatase [Source:GMGC_GENE;Acc:GSMUA_Achr6G14300_001]

Coordinates

chr6:-:9423722..9425692

Molecular Weight (calculated)

40698.3 Da

IEP (calculated)

4.592

GRAVY (calculated)

-0.511

Length

353 amino acids

Sequence
(BLAST)

001: MGLERLRAQE IETNSTEKEV IDENEERIAK MSSRDCRCDE PTRELQSNED AVESSAEEAY AAWMARFDHH PSALIAFDRM MSIAKEKMVV VFLDYDGTLS
101: PIVDDPDRAF MSDSMRSAVN KVAQYFPTCI ISGRRRDKVY EFVKLTNVYY VGSHGMDIMA PLKPVDEIDS ALHEQAIKEK GNEGVLFQPA EEYLPMIEEV
201: YSELKEKTKE IQGVLIENNK FCISVHFRRV DEEDWSLLEN QVMDTMKNYP ALLITRGRKV IEIRPSIKWD KGRALEYLLE TLGFGNNDET LPLYIGDDRT
301: DEDAFKVLQR RGQGYPIIVS SVPKDTEASY SLRDPSEVMS FLLHLFRWKR DSS

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.