CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 3
vacuole 4
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64499	Soybean	golgi, mitochondrion	93.73	93.73
VIT_16s0050g02600.t01	Wine grape	mitochondrion	56.4	60.7
PGSC0003DMT400023513	Potato	cytosol, mitochondrion, plastid	49.86	55.62
Solyc03g007290.2.1	Tomato	cytosol, mitochondrion, nucleus	50.68	55.36
KRH06490	Soybean	cytosol	46.05	53.99
KRH75558	Soybean	cytosol, extracellular, peroxisome	9.54	53.03
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	49.59	51.56
KRH26019	Soybean	cytosol	12.81	49.47
KRH30218	Soybean	plastid	28.34	48.6
KRH49582	Soybean	mitochondrion	37.33	48.07
KRG98938	Soybean	plastid	18.26	46.21
KRH23805	Soybean	cytosol	47.96	45.24
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.5	45.01
KRH39976	Soybean	peroxisome	47.41	44.73
KRH31279	Soybean	plastid	43.87	44.35
KRH59366	Soybean	plastid	43.6	44.2
KRG97593	Soybean	plastid	43.87	44.11
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.5	43.95
KRH62612	Soybean	cytosol	45.5	43.72
KRH43210	Soybean	cytosol, nucleus, peroxisome	43.32	43.44
KRH04085	Soybean	nucleus, plastid	42.51	43.09
KRH56343	Soybean	cytosol	44.69	41.84
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.23	41.67
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	41.96	40.63
KRH38605	Soybean	cytosol	29.97	21.28

Protein Annotations

EntrezGene:100809194	MapMan:3.3.2	Gene3D:3.40.50.1000	EMBL:ACUP02003464	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G126300
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:K7KUR9	EnsemblPlants:KRH53451	ProteinID:KRH53451
ProteinID:KRH53451.1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR00685
TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002949B29	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:10331312..10341252

Molecular Weight (calculated)

42048.6 Da

IEP (calculated)

9.435

GRAVY (calculated)

-0.327

Length

367 amino acids

Sequence
(BLAST)

001: MKYLFILLVT FKIIKRKFTQ LREAMGFQTS HSTKRIQQSI FKAKEDSIDA HENSLIRRTT LNFTDHTQTN SMFTLSSYNS WVVRHPSALN TFDRLMKGAN
101: GKRIIVFLDY DGTLSPIVND PDRAFMSDEM RAAVYEIATY FPTAIISGRS RDKVKDFVKL NNLYYAGSHG MDIMAPSMPV TSSDGKHFGI ARNTNGIEVP
201: FQPAKKFLPA IREIIRVLKN EVKEIKGAMI EDNGFCLSVH FRQVQEKDYD VLEEKVKSVL ENNPQFCLTE GKKVMEIRPS IKWNKGNAVE YFLDTLGLSS
301: CSDILPVYIG DDRTDEDAFK VIQSREQGYP IIVSSIPRET NALYSLRDPS EVLIFLSRLA KWRRTSY

Best Arabidopsis Sequence Match ( AT1G22210.1 )
(BLAST)

001: MKITDISGKI ETLVDSLRDM SPTRVRSSFS DEHVSENDDE RSSWIALHPS ALDMFEQIMR DAEGKQIIMF LDYDGTLSLI TEDHDRAYIT DEMREVVKEV
101: ATYFKTAIIS GRSTDKVQSF VKLTGIHYAG SHGMDIKGPT NTDQSNQEEV MFQPASDYLP MIDEVVNVLK EKTKSIPGAT VEHNKFCLTV HFRRVDETGW
201: AALAEQVRLV LIDYPKLRLT QGRKVLELRP SIKWDKGKAL EFLLNSLGIA ESKDVLPVYI GDDRTDEDAF KVLCERGQGF GIIVSKTIKE TYASYSLQDP
301: SQVKEFLERL VKWKKQTLGE

Arabidopsis Description

TPPCProbable trehalose-phosphate phosphatase C [Source:UniProtKB/Swiss-Prot;Acc:F4I1A6]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.