CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
mitochondrion 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid, vacuole
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53451	Soybean	golgi, vacuole	93.73	93.73
VIT_16s0050g02600.t01	Wine grape	mitochondrion	55.86	60.12
PGSC0003DMT400023513	Potato	cytosol, mitochondrion, plastid	50.68	56.53
Solyc03g007290.2.1	Tomato	cytosol, mitochondrion, nucleus	51.23	55.95
KRH75558	Soybean	cytosol, extracellular, peroxisome	9.81	54.55
KRH06490	Soybean	cytosol	45.5	53.35
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	48.77	50.71
KRH26019	Soybean	cytosol	13.08	50.53
KRH30218	Soybean	plastid	27.79	47.66
KRH49582	Soybean	mitochondrion	36.78	47.37
KRH23805	Soybean	cytosol	48.77	46.02
KRH39976	Soybean	peroxisome	48.23	45.5
KRH59366	Soybean	plastid	44.41	45.03
KRG98938	Soybean	plastid	17.71	44.83
KRH62612	Soybean	cytosol	46.59	44.76
KRH31279	Soybean	plastid	43.87	44.35
KRH43210	Soybean	cytosol, nucleus, peroxisome	44.14	44.26
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	44.69	44.2
KRG97593	Soybean	plastid	43.87	44.11
KRH04085	Soybean	nucleus, plastid	43.32	43.92
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	44.69	43.16
KRH56343	Soybean	cytosol	46.05	43.11
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	41.96	41.4
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	41.69	40.37
KRH38605	Soybean	cytosol	31.34	22.24

Protein Annotations

EntrezGene:100819120	MapMan:3.3.2	Gene3D:3.40.50.1000	EMBL:ACUP02002766	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G237900
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:K7KLZ2	EnsemblPlants:KRH64499	ProteinID:KRH64499
ProteinID:KRH64499.1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR00685
TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI000233A08B	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:50633442..50637326

Molecular Weight (calculated)

41774.3 Da

IEP (calculated)

9.123

GRAVY (calculated)

-0.297

Length

367 amino acids

Sequence
(BLAST)

001: MKYLFLLLVT FKIMKRKFTQ LRESMGFQTS HSTKRIPQPI FKAKEDLIDA HENSLIRRTT LNLTDHTQTN SMFTLSGYDS WVVRHPSALN SFDRLMKAAS
101: GKRIIVFLDY DGTLSPIVND PDRAFMSDEM RAAVYEVATY FPTAIISGRS RDKVKGFVKL NNLYYAGSHG MDIMAPSMAV TSSDGKHFDI ARNTNGTEVP
201: FQPAKKFLPA IGEIIRVLKN EVKEIKGAMV EDNGFCLSVH FRQVQEKDYD VLEAKVKSVL ENNPEFCLTE GKKVMEIRPS IKWNKGNAVE YFLDTLGLSS
301: CNDILPVYIG DDRTDEDAFK VIQSREQGYP IIVSSIPRET NALYSLRDPS EVLIFLSRLA KWRKTSY

Best Arabidopsis Sequence Match ( AT1G22210.1 )
(BLAST)

001: MKITDISGKI ETLVDSLRDM SPTRVRSSFS DEHVSENDDE RSSWIALHPS ALDMFEQIMR DAEGKQIIMF LDYDGTLSLI TEDHDRAYIT DEMREVVKEV
101: ATYFKTAIIS GRSTDKVQSF VKLTGIHYAG SHGMDIKGPT NTDQSNQEEV MFQPASDYLP MIDEVVNVLK EKTKSIPGAT VEHNKFCLTV HFRRVDETGW
201: AALAEQVRLV LIDYPKLRLT QGRKVLELRP SIKWDKGKAL EFLLNSLGIA ESKDVLPVYI GDDRTDEDAF KVLCERGQGF GIIVSKTIKE TYASYSLQDP
301: SQVKEFLERL VKWKKQTLGE

Arabidopsis Description

TPPCProbable trehalose-phosphate phosphatase C [Source:UniProtKB/Swiss-Prot;Acc:F4I1A6]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.