CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 1
peroxisome 2
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31279	Soybean	plastid	98.36	98.9
KRH26019	Soybean	cytosol	23.56	90.53
KRH75558	Soybean	cytosol, extracellular, peroxisome	15.89	87.88
KRH59366	Soybean	plastid	81.1	81.77
KRH43210	Soybean	cytosol, nucleus, peroxisome	81.64	81.42
PGSC0003DMT400056161	Potato	cytosol	45.75	78.04
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	67.4	77.6
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	75.07	73.46
PGSC0003DMT400053144	Potato	plastid	76.44	72.28
AT5G65140.1	Thale cress	plastid	72.88	71.89
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	52.6	69.06
Bra024359.1-P	Field mustard	plastid	62.74	68.15
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	52.05	67.86
CDY08815	Canola	plastid	67.4	67.77
Solyc05g051880.2.1	Tomato	plastid	51.78	67.5
AT5G10100.1	Thale cress	plastid	69.86	67.11
CDY31283	Canola	plastid	67.67	65.87
Bra031879.1-P	Field mustard	plastid	67.95	65.44
Bra009057.1-P	Field mustard	plastid	64.66	63.44
GSMUA_AchrUn_...	Banana	peroxisome	64.66	63.27
KRH30218	Soybean	plastid	36.99	63.08
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.84	62.63
KRH49582	Soybean	mitochondrion	48.22	61.75
GSMUA_Achr6P30350_001	Banana	plastid	60.55	61.73
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	62.74	61.73
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	63.01	60.69
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.01	60.53
GSMUA_Achr10P...	Banana	plastid	60.55	59.73
GSMUA_Achr10P...	Banana	plastid	64.93	58.66
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	58.36	56.8
CDY14544	Canola	endoplasmic reticulum, plasma membrane	67.95	54.63
KRG98938	Soybean	plastid	21.1	53.1
KRH04085	Soybean	nucleus, plastid	49.86	50.28
KRH39976	Soybean	peroxisome	53.42	50.13
KRH23805	Soybean	cytosol	53.15	49.87
KRH62612	Soybean	cytosol	51.78	49.48
KRH56343	Soybean	cytosol	52.33	48.72
KRH06490	Soybean	cytosol	40.82	47.6
KRH53451	Soybean	golgi, vacuole	44.11	43.87
KRH64499	Soybean	golgi, mitochondrion	44.11	43.87
OQU89414	Sorghum	cytosol	18.63	40.24
KRH38605	Soybean	cytosol	50.14	35.4

Protein Annotations

EntrezGene:100815357	MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EMBL:ACUP02010801	EnsemblPlantsGene:GLYMA_18G018100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1MYT2	InterPro:IPR023214	EnsemblPlants:KRG97593	ProteinID:KRG97593
ProteinID:KRG97593.1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF18	SUPFAM:SSF56784	TIGRFAMs:TIGR00685
TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI00023DA09B	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:1312068..1315259

Molecular Weight (calculated)

41202.5 Da

IEP (calculated)

9.725

GRAVY (calculated)

-0.434

Length

365 amino acids

Sequence
(BLAST)

001: MTQQNVVVSD TKSGVSLTVF PTTTQKPPAA PGGYISIPRR RVLKNLEING GQRINAWVES MRASSPTHHK STPLSQEHNS WILHHPSALD MFDQIIDASK
101: GKQIVMFLDY DGTLSPIVDD PDRAFMSDSM RKTVRKLARC FPTAIVTGRC KDKVYNFVRL AELYYAGSHG MDIKGPTRSS KYNKDSKAEA ILCQPASDFL
201: PLIDEVYQQL VEKTKSTPGA LVENNKFCLS VHFRCVDEKK WSELARQVKS VLKEYPKLRL TQGRKVLEIR PTIKWDKGKA LEFLLESLGL ANCSDVFPVY
301: IGDDRSDEDA FKKLRDRGQG FGILVSKFPK DTSASYSLQE PNEVMNFLQR LVEWKHVSLG ARSRV

Best Arabidopsis Sequence Match ( AT5G65140.1 )
(BLAST)

001: MVSQNVVVSD AKTGIITVST VSNSSVFTPT AQKPPTAPGY ISVSKKKLLK NLEINGADQS QRLNSWVDSM RASSPTHLKS LSSFSSEEEH NSWIKRHPSA
101: LNMFERIIEE ARGKQIVMFL DYDGTLSPIV DDPDRAFMTS KMRRTVKKMA KCFPTSIVTG RCIDKVYSFV KLAELYYAGS HGMDIKGPTK GFSRYNKDKP
201: SVLYQPAGDF LPMIDEVYKQ LVEKTKSTPG AKVENNKFCL SVHFRCVDEK KWSELASKVR SVVKNYPTLK LSQGRKVFEI RPIIKWNKGK ALEFLLESLG
301: FENCNDVFPI YIGDDKTDED AFKLLRGRGQ GFGILVSKFP KDTSASYSLQ DPPEVMNFLG RLVEWKQMQQ

Arabidopsis Description

TPPJProbable trehalose-phosphate phosphatase J [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ05]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.