CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031879.1-P	Field mustard	plastid	94.4	93.4
CDY08815	Canola	plastid	86.93	89.81
AT5G65140.1	Thale cress	plastid	85.6	86.76
CDY14544	Canola	endoplasmic reticulum, plasma membrane	91.73	75.77
KRH26019	Soybean	cytosol	18.93	74.74
PGSC0003DMT400056161	Potato	cytosol	41.33	72.43
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	58.13	68.77
KRH31279	Soybean	plastid	66.4	68.59
KRH75558	Soybean	cytosol, extracellular, peroxisome	12.0	68.18
CDY70318	Canola	mitochondrion	42.13	67.81
KRG97593	Soybean	plastid	65.87	67.67
KRH43210	Soybean	cytosol, nucleus, peroxisome	65.6	67.21
KRH59366	Soybean	plastid	64.0	66.3
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	65.33	65.68
PGSC0003DMT400053144	Potato	plastid	66.67	64.77
CDY15842	Canola	cytosol	57.6	63.91
Solyc05g051880.2.1	Tomato	plastid	47.47	63.57
CDY39454	Canola	cytosol	40.8	63.49
CDY63411	Canola	cytosol	57.33	63.42
CDX90361	Canola	cytosol, peroxisome, plastid	58.93	62.43
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	46.13	62.23
CDY26849	Canola	mitochondrion	38.4	61.8
CDY22393	Canola	cytosol	58.67	59.3
GSMUA_Achr6P30350_001	Banana	plastid	55.2	57.82
CDY14635	Canola	plastid	57.87	57.56
CDX87477	Canola	plastid	57.6	57.14
GSMUA_AchrUn_...	Banana	peroxisome	56.8	57.1
CDY26848	Canola	plastid	57.6	56.99
CDX88416	Canola	plastid	56.8	56.35
GSMUA_Achr10P...	Banana	plastid	55.2	55.95
CDX72676	Canola	mitochondrion	56.8	55.91
GSMUA_Achr10P...	Banana	plastid	57.07	52.97
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	52.8	52.8
CDX94101	Canola	cytosol	14.13	52.48
CDX94103	Canola	nucleus	44.0	45.58
CDX98760	Canola	nucleus	44.0	45.58
CDY66417	Canola	plastid	45.87	45.38
CDY56658	Canola	plastid	45.6	45.12
CDX82953	Canola	plastid	44.53	44.53
CDX79165	Canola	plastid	44.53	44.53
CDY00477	Canola	plastid	45.6	44.3
CDX99919	Canola	plastid	45.33	43.93
CDX90831	Canola	mitochondrion	7.73	40.28
OQU89414	Sorghum	cytosol	17.33	38.46
CDY37091	Canola	plastid	26.13	37.69
CDX98758	Canola	cytosol, nucleus, peroxisome	14.4	36.0
KRH38605	Soybean	cytosol	41.87	30.37

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:A0A078H353	UniProt:A0A078H353	EnsemblPlants:CDY31283
ProteinID:CDY31283	ProteinID:CDY31283.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00047446001	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF18	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484
InterPro:Trehalose_PPase	UniParc:UPI0004EE2EEE	SEG:seg	:	:	:

Description

BnaA02g34580DTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078H353]

Coordinates

chrLK032270:+:18300..21331

Molecular Weight (calculated)

41689.1 Da

IEP (calculated)

9.487

GRAVY (calculated)

-0.322

Length

375 amino acids

Sequence
(BLAST)

001: MVSQNVVVSD ANTGIITVSN SSVFAPSAQK PPTVPGHISI SKKKLLKNLE LSGAQSQRLN SWVDSMRASS PTHLKSLSSL SSEDELNSWL KRHPSALDMF
101: ERIIEASRGK QIVMFLDYDG TLSPIVADPD RAFITSKMRR TVKKLAKSFP TSIVTGRCID KVYSFVKLAE LYYAGSHGMD IKGPTKGFSR YNKDKPSVLY
201: QPAGDFLPMI DEVFKQLVEK TKSTPGAKVE NNKFCLSVHF RCVDEKKWSD LALKVRSVVK NYPTLKLSQG RKVFEIRPMI KWDKGKALEF LLESLGFENS
301: NDVFPIYIGD DRTDEDAFKL LQERGQGFGI LVSEFPKDTN ASYSLQDPPE ASDGFLATVG GVETNSTMIM KGAME

Best Arabidopsis Sequence Match ( AT5G65140.1 )
(BLAST)

001: MVSQNVVVSD AKTGIITVST VSNSSVFTPT AQKPPTAPGY ISVSKKKLLK NLEINGADQS QRLNSWVDSM RASSPTHLKS LSSFSSEEEH NSWIKRHPSA
101: LNMFERIIEE ARGKQIVMFL DYDGTLSPIV DDPDRAFMTS KMRRTVKKMA KCFPTSIVTG RCIDKVYSFV KLAELYYAGS HGMDIKGPTK GFSRYNKDKP
201: SVLYQPAGDF LPMIDEVYKQ LVEKTKSTPG AKVENNKFCL SVHFRCVDEK KWSELASKVR SVVKNYPTLK LSQGRKVFEI RPIIKWNKGK ALEFLLESLG
301: FENCNDVFPI YIGDDKTDED AFKLLRGRGQ GFGILVSKFP KDTSASYSLQ DPPEVMNFLG RLVEWKQMQQ

Arabidopsis Description

TPPJProbable trehalose-phosphate phosphatase J [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ05]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.