CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022549.1-P	Field mustard	cytosol, plastid	99.21	99.21
CDY66417	Canola	plastid	98.15	98.15
AT5G51460.3	Thale cress	nucleus, plastid	93.14	91.69
CDY00477	Canola	plastid	89.45	87.82
CDX99919	Canola	plastid	89.45	87.6
Solyc03g083960.2.1	Tomato	plastid	66.49	68.66
PGSC0003DMT400035990	Potato	peroxisome, plastid	69.13	68.23
KRH39976	Soybean	peroxisome	69.39	67.61
KRH23805	Soybean	cytosol	69.39	67.61
VIT_16s0022g00660.t01	Wine grape	plastid	68.6	67.53
HORVU2Hr1G075440.2	Barley	cytosol	23.22	67.18
HORVU4Hr1G036870.1	Barley	mitochondrion	36.41	64.79
KRH62612	Soybean	cytosol	64.38	63.87
CDX94101	Canola	cytosol	16.89	63.37
KRH56343	Soybean	cytosol	64.64	62.5
CDX94103	Canola	nucleus	59.37	62.15
CDX98760	Canola	nucleus	59.37	62.15
HORVU2Hr1G104360.2	Barley	cytosol, peroxisome, plastid	48.28	61.82
CDX82953	Canola	plastid	60.42	61.07
CDX79165	Canola	plastid	60.16	60.8
CDY70318	Canola	mitochondrion	36.94	60.09
TraesCS1A01G210400.1	Wheat	plastid	58.84	58.53
TraesCS1D01G213700.1	Wheat	plastid	58.58	58.27
Os10t0553300-01	Rice	cytosol, nucleus, peroxisome	58.05	57.59
EER91963	Sorghum	cytosol	57.78	57.33
CDY26849	Canola	mitochondrion	35.09	57.08
Zm00001d047110_P001	Maize	cytosol	56.73	56.43
HORVU1Hr1G053770.2	Barley	plastid	57.52	55.61
CDX90361	Canola	cytosol, peroxisome, plastid	48.02	51.41
TraesCS1B01G224300.2	Wheat	golgi, vacuole	58.58	50.68
CDY26848	Canola	plastid	49.34	49.34
CDY14635	Canola	plastid	49.08	49.34
CDY15842	Canola	cytosol	43.8	49.11
CDY63411	Canola	cytosol	43.8	48.97
CDX87477	Canola	plastid	48.55	48.68
CDX90831	Canola	mitochondrion	9.23	48.61
CDY39454	Canola	cytosol	30.87	48.55
CDX88416	Canola	plastid	48.02	48.15
CDY22393	Canola	cytosol	46.17	47.17
CDY08815	Canola	plastid	45.12	47.11
CDX72676	Canola	mitochondrion	45.91	45.67
CDY31283	Canola	plastid	45.12	45.6
CDX98758	Canola	cytosol, nucleus, peroxisome	17.15	43.33
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	22.96	38.84
CDY14544	Canola	endoplasmic reticulum, plasma membrane	45.12	37.67
CDY37091	Canola	plastid	23.48	34.23

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	GO:A0A078IXJ6	UniProt:A0A078IXJ6	EnsemblPlants:CDY56658	ProteinID:CDY56658
ProteinID:CDY56658.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00019888001	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358
PANTHER:PTHR43768	PANTHER:PTHR43768:SF6	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase
UniParc:UPI0004EF4519	SEG:seg	:	:	:	:

Description

BnaA02g11230DTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078IXJ6]

Coordinates

chrLK033508:+:49826..52540

Molecular Weight (calculated)

42479.0 Da

IEP (calculated)

7.494

GRAVY (calculated)

-0.256

Length

379 amino acids

Sequence
(BLAST)

001: MEIKSGHSSP VMTDTPPISN SRLTIRQNRL LCSSAALSQN NNLLLTVPRK KTGILDDVKS CGWLDAMKSS SPPPAILNKD SISSDASYRE WTLKYPSALT
101: SFEKIMSFAK GKRIALFLDY DGTLSPIVEE PDCAYMSSAM RTAVQNVAKY FPTAIISGRS RDKVYEFVGL SELYYAGSHG MDIMSPAGES LNHEHLSRTV
201: SVNEQGKDVN LFQPASEFLP MIDKVLCSLV EITKDIKGVK VEDNKFCISV HYRNVEEKNW TLVAQRVEYV IRTYPKLRLT HGRKVLEIRP VIDWDKGKAV
301: TFLLESLGLN NCDDVLPIYV GDDRTDEDAF KVLRDGPNHG YGVLVSAVPK DTNAFYSLRD PSEVMEFLKS LVTWKRSMV

Best Arabidopsis Sequence Match ( AT5G51460.4 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMLK
101: YPSALTSFEK IMSFAKGKRI ALFLDYDGTL SPIVEEPDCA YMSSAMRSAV QNVAKYFPTA IISGRSRDKV YEFVNLSELY YAGSHGMDIM SPAGESLNHE
201: HSRTVSVYEQ GKDVNLFQPA SEFLPMIDKV LCSLIESTKD IKGVKVEDNK FCISVHYRNV EEKNWTLVAQ CVDDVIRTYP KLRLTHGRKV LEIRPVIDWD
301: KGKAVTFLLE SLGLNNCEDV LPIYVGDDRT DEDAFKVLRD GPNHGYGILV SAVPKDSNAF YSLRDPSEVM EFLKSLVTWK RSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.