Factsheet for TraesCS1B01G224300.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G213700.1	Wheat	plastid	85.62	98.43
TraesCS1A01G210400.1	Wheat	plastid	85.62	98.43
HORVU2Hr1G075440.2	Barley	cytosol	28.54	95.42
HORVU4Hr1G036870.1	Barley	mitochondrion	44.98	92.49
HORVU1Hr1G053770.2	Barley	plastid	82.42	92.09
HORVU2Hr1G104360.2	Barley	cytosol, peroxisome, plastid	58.68	86.82
Os10t0553300-01	Rice	cytosol, nucleus, peroxisome	74.89	85.86
Zm00001d047110_P001	Maize	cytosol	70.32	80.84
EER91963	Sorghum	cytosol	70.32	80.63
VIT_16s0022g00660.t01	Wine grape	plastid	56.39	64.16
Solyc03g083960.2.1	Tomato	plastid	52.74	62.94
PGSC0003DMT400035990	Potato	peroxisome, plastid	55.02	62.76
KRH39976	Soybean	peroxisome	54.11	60.93
KRH62612	Soybean	cytosol	52.74	60.47
KRH23805	Soybean	cytosol	53.65	60.41
KRH56343	Soybean	cytosol	52.97	59.18
CDY66417	Canola	plastid	51.14	59.1
AT5G51460.3	Thale cress	nucleus, plastid	51.83	58.96
Bra022549.1-P	Field mustard	cytosol, plastid	50.91	58.84
CDY56658	Canola	plastid	50.68	58.58
Bra028254.1-P	Field mustard	plastid	50.0	57.33
CDY00477	Canola	plastid	50.23	56.99
CDX99919	Canola	plastid	50.0	56.59
TraesCS6B01G276300.1	Wheat	plastid	47.95	56.45
TraesCS2B01G430700.1	Wheat	plastid	44.75	52.83
TraesCS7B01G085800.1	Wheat	peroxisome, plastid	40.41	48.63
TraesCS2B01G187100.1	Wheat	cytosol, plastid	39.27	48.04
TraesCS2B01G187200.1	Wheat	cytosol, plastid	39.04	47.77
TraesCS2B01G187000.1	Wheat	peroxisome, plastid	38.13	46.65
TraesCS6B01G330900.1	Wheat	cytosol	41.32	44.47
TraesCS5B01G193100.2	Wheat	plastid	41.32	43.61
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	18.95	37.05
TraesCS2B01G193300.1	Wheat	plasma membrane	31.51	24.69

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF6	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS1B01G224300	EnsemblPlants:TraesCS1B01G224300.2
InterPro:Trehalose_PPase	TIGR:cd01627	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:402147526..402150391

Molecular Weight (calculated)

49458.3 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.238

Length

438 amino acids

Sequence
(BLAST)

001: MLCTCPLLAV TLLNYCPWSG PVRYRSLPLR DINRVFRLLS WLRFMHVCSD EKIPVFFIDK RTSHNSPVFV DPLPSLALPM TYTTPTSFPS SGLYLNTPKK
101: KPLPSKIEEV RAAGWLDLML ASSPPRKRQS KDFLPHDVQA DDLDLRYRNW MVNYPSALGS FEAITELARG KKMALFLDYD GTLSPIVDNP ANAVMSDEMR
201: AAVRHVASLF PTAIISGRSR DKVFDFVKLT ELYYAGSHGM DIMGPIRKSE SNGHHVECVR STDSEGKEVN LFQPASEFLP MIAEVFENLS ESIKDIEGAR
301: MEDNKFCVSV HYRNVAPHDY ETVHQRVTAV LKDYPCLRLT HGRKVLEVRP VIDWNKGKAV EFLLESLGLN ESDDVLPIYV GDDKTDEDAF KVLKANNHGF
401: GILVSSVPKD SDAFYSLRDP SEVMEFLRTL AAWKEGSS

Best Arabidopsis Sequence Match ( AT4G22590.1 )
(BLAST)

001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF

Arabidopsis Description

TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.