Factsheet for TraesCS2B01G193300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G167100.1	Wheat	nucleus, peroxisome, plastid	43.11	96.79
TraesCS2A01G167200.1	Wheat	extracellular	38.1	80.99
HORVU3Hr1G015310.1	Barley	extracellular	20.57	45.1
TraesCS3D01G085800.1	Wheat	mitochondrion	45.44	43.49
TraesCS6B01G276300.1	Wheat	plastid	26.83	40.32
TraesCS2B01G430700.1	Wheat	plastid	26.12	39.35
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	18.96	38.97
TraesCS2B01G187200.1	Wheat	cytosol, plastid	23.79	37.15
TraesCS2B01G187100.1	Wheat	cytosol, plastid	23.61	36.87
TraesCS7B01G085800.1	Wheat	peroxisome, plastid	23.26	35.71
TraesCS2B01G187000.1	Wheat	peroxisome, plastid	22.54	35.2
TraesCS5B01G193100.2	Wheat	plastid	25.58	34.46
TraesCS6B01G330900.1	Wheat	cytosol	24.15	33.17
TraesCS1B01G224300.2	Wheat	golgi, vacuole	24.69	31.51

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.430.20	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	ncoils:Coil	InterPro:GNK2
InterPro:GNK2_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR002902	InterPro:IPR023214	InterPro:IPR038408	PFAM:PF01657	PFAM:PF02358	PFscan:PS51473
PANTHER:PTHR43768	PANTHER:PTHR43768:SF11	SUPFAM:SSF56784	SignalP:SignalP-noTM	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G193300	EnsemblPlants:TraesCS2B01G193300.1	InterPro:Trehalose_PPase	TIGR:cd01627	SEG:seg

Description

No Description!

Coordinates

chr2B:-:168831609..168853380

Molecular Weight (calculated)

62285.0 Da

IEP (calculated)

8.410

GRAVY (calculated)

-0.230

Length

559 amino acids

Sequence
(BLAST)

001: MYRGMKIPAV AALAFVLTRV SLASPGYWAH DCDGNYTVPS SYQKSLEQLS AGLPDAVSSS PDLFDKKVLG SWGSRVYGLG RCRPGTDAST CKACLDEAFQ
101: EAQVICPLRK RVYMYYEVCT LAFADEDLPS HSAVHKVATK VNGSQVPAQC SKVFDMAINE LITYLVKMAA VSPHMSATGQ KELAGGACTY SIYGLAECFP
201: KMSAANCSDC LEDLLVVPFL HGHQSEWRSS LTCSYRLEPR PLFDVGKGGL ATPGGKNGKK QVWIVVGCVA GALIILLVLL LLWWKLPAKR PSAIKFFDDI
301: IANVQGKTIV MFLDYDGTLT PIVKKPERAF MSEQTRNAVR ELAMAFSTSV VTGRSCEKAK GFIQLDELHY AGSHGQDIQL NDGTDPFQPN SEYLQIIAEA
401: TERLKEAVRE IKGASVENNK FCVSVHYREV RREKDKDLLK NIVMRIVTEE FPNLKVTNGK KVREVRPGPK FDKGDAVKYL LQQLTNKHSW DSSRILPIYI
501: GDDKTDEDAF KVLSEEGGFG IRVCKWRKRT AAEYSLKNPS EVKEFLEKLV RWRREQDQV

Best Arabidopsis Sequence Match ( AT1G22210.1 )
(BLAST)

001: MKITDISGKI ETLVDSLRDM SPTRVRSSFS DEHVSENDDE RSSWIALHPS ALDMFEQIMR DAEGKQIIMF LDYDGTLSLI TEDHDRAYIT DEMREVVKEV
101: ATYFKTAIIS GRSTDKVQSF VKLTGIHYAG SHGMDIKGPT NTDQSNQEEV MFQPASDYLP MIDEVVNVLK EKTKSIPGAT VEHNKFCLTV HFRRVDETGW
201: AALAEQVRLV LIDYPKLRLT QGRKVLELRP SIKWDKGKAL EFLLNSLGIA ESKDVLPVYI GDDRTDEDAF KVLCERGQGF GIIVSKTIKE TYASYSLQDP
301: SQVKEFLERL VKWKKQTLGE

Arabidopsis Description

TPPCProbable trehalose-phosphate phosphatase C [Source:UniProtKB/Swiss-Prot;Acc:F4I1A6]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.