Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G085700.1 | Wheat | vacuole | 80.0 | 36.89 |
| TraesCS3D01G085800.1 | Wheat | mitochondrion | 78.43 | 34.25 |
| TraesCS2B01G193300.1 | Wheat | plasma membrane | 45.1 | 20.57 |
| HORVU6Hr1G066240.1 | Barley | plastid | 8.24 | 14.48 |
| HORVU1Hr1G061580.4 | Barley | plastid | 8.24 | 10.34 |
| HORVU6Hr1G074960.2 | Barley | cytosol | 8.63 | 5.87 |
| HORVU5Hr1G058300.1 | Barley | plastid | 9.8 | 5.85 |
| HORVU1Hr1G053770.2 | Barley | plastid | 8.63 | 5.61 |
| HORVU0Hr1G023540.3 | Barley | plastid | 7.84 | 5.39 |
| HORVU6Hr1G063370.1 | Barley | plastid | 7.84 | 5.39 |
| HORVU7Hr1G037140.1 | Barley | plastid | 6.67 | 4.7 |
| HORVU2Hr1G029290.1 | Barley | golgi, mitochondrion, peroxisome, plastid | 6.27 | 3.95 |
| HORVU2Hr1G097300.2 | Barley | plastid | 4.71 | 3.27 |
| HORVU2Hr1G075440.2 | Barley | cytosol | 0.78 | 1.53 |
| OQU78907 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 1.57 | 1.47 |
| HORVU2Hr1G104360.2 | Barley | cytosol, peroxisome, plastid | 1.57 | 1.35 |
| HORVU4Hr1G036870.1 | Barley | mitochondrion | 0.78 | 0.94 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G015310.1 | EnsemblPlantsGene:HORVU3Hr1G015310 | Gene3D:3.30.430.20 | InterPro:GNK2 | InterPro:GNK2_sf | InterPro:IPR002902 |
| InterPro:IPR038408 | PANTHER:PTHR32099 | PANTHER:PTHR32099:SF21 | PFAM:PF01657 | PFscan:PS51473 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B48122F | UniProt:A0A287K7H5 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr3H:-:35750504..35753149
Molecular Weight (calculated)
28409.7 Da
IEP (calculated)
7.569
GRAVY (calculated)
-0.359
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTQMYRGHA VMVALVLLTT VTAASPMTGY WDYLCDDGNY TAPSKYQQNL EKLSTTLPEA VASSPTLFYR QIAGSSQDRI HALARCHGDT EAYDCERCLT
101: RAFQDARVVC TFRKSVSIYY DTCSLWFAEK NIKIHLGYWK SDLMADGPPI PAYCKAFKKD ASTLIADVAR KAADSPQRHA TGEKDRDERA CKYKLYSYAD
201: CLPGISAAEC QACLEDLTTT PNLSGGQMGE RKATLLCSYR LEPYQFFKAT KGELP
101: RAFQDARVVC TFRKSVSIYY DTCSLWFAEK NIKIHLGYWK SDLMADGPPI PAYCKAFKKD ASTLIADVAR KAADSPQRHA TGEKDRDERA CKYKLYSYAD
201: CLPGISAAEC QACLEDLTTT PNLSGGQMGE RKATLLCSYR LEPYQFFKAT KGELP
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.