Factsheet for TraesCS3A01G085700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G015310.1	Barley	extracellular	36.89	80.0
TraesCS2A01G167100.1	Wheat	nucleus, peroxisome, plastid	23.69	52.61
TraesCS2A01G167200.1	Wheat	extracellular	22.06	46.39
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.34	43.38
TraesCS1A01G210400.1	Wheat	plastid	25.32	36.75
TraesCS6A01G248400.1	Wheat	cytosol, plastid	24.41	36.29
TraesCS2A01G161100.1	Wheat	cytosol, plastid	23.33	36.03
TraesCS2A01G161200.1	Wheat	cytosol, plastid	22.97	35.47
TraesCS5A01G190000.1	Wheat	plastid	23.69	35.12
TraesCS2A01G161000.1	Wheat	plastid	22.06	34.17
TraesCS7A01G180800.1	Wheat	peroxisome, plastid	22.24	34.07
TraesCS2A01G412100.1	Wheat	plastid	21.88	32.7
TraesCS6A01G301800.1	Wheat	cytosol, nucleus, peroxisome, plastid	24.41	32.45

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.430.20	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	ncoils:Coil	InterPro:GNK2
InterPro:GNK2_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR002902	InterPro:IPR023214	InterPro:IPR038408	PFAM:PF01657	PFAM:PF02358	PFscan:PS51473
PANTHER:PTHR43768	PANTHER:PTHR43768:SF11	SUPFAM:SSF56784	SignalP:SignalP-noTM	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G085700	EnsemblPlants:TraesCS3A01G085700.1	InterPro:Trehalose_PPase	TIGR:cd01627	SEG:seg

Description

No Description!

Coordinates

chr3A:+:55223622..55255799

Molecular Weight (calculated)

61557.5 Da

IEP (calculated)

7.927

GRAVY (calculated)

-0.291

Length

553 amino acids

Sequence
(BLAST)

001: MDMQMYRGHA VVAALVLLTT VTAASPTGYW GYLCDGGNYS APSKYQQNLE QLSATLPEAV ASSPTLFHTQ AVGSSHDRAY ALARCRGDTE ADDCRRCLTQ
101: AFQDARAVCT FRKGISIYYD TCSLWFAEKK IKIHLGDSQS VLRADGPPIP TQCKAFQNDA STLIADVARK ASDSSQRYAT GEKGRDERAC NYTLYTLADC
201: LPGISAAQCQ VCLEDLTSTP GLSGGQMGER KATLLCSYRL EPYQFFRDTK GHKNKTVWIV VGVAGGAVLL AIALLLWWWL LAKRPSAIDS FNKITANWQG
301: KTIALFLDYD GTLAPKVDNP DEAYMSSEMR EVVQELASLC ATSVVSGRAR YKTESFVMIE NLHYAGSHGA EIKLIDETEA YEPAREYVPV INQARERLEE
401: AIKEIKGASI EHKKFGISVH YRCVEEEEQE LVKKLAKQTI KGFSELTVTK GDKVVEVRPK AEFNKGFAVK YILEQLARKN NWDSSQVVAI FIGDDKTDED
501: AFKVLWKRVG GLGILVNKKR KWTKASYSLE DPAQVQKFLQ MLLSWKKKAE AEV

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.