Factsheet for TraesCS6A01G301800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G281100.1	Wheat	plastid	87.74	98.92
HORVU6Hr1G074960.2	Barley	cytosol	84.38	93.6
TraesCS6B01G330900.1	Wheat	cytosol	87.26	89.19
Zm00001d052227_P001	Maize	cytosol	74.52	87.08
KXG30780	Sorghum	cytosol	75.48	84.41
Os02t0753000-01	Rice	cytosol	73.32	83.11
Zm00001d018082_P001	Maize	cytosol	73.56	76.88
TraesCS7A01G180800.1	Wheat	peroxisome, plastid	59.38	68.42
CDY26849	Canola	mitochondrion	36.06	64.38
TraesCS5A01G190000.1	Wheat	plastid	56.73	63.27
VIT_18s0001g05300.t01	Wine grape	plastid	55.05	61.07
Solyc04g072920.2.1	Tomato	extracellular	53.12	60.55
PGSC0003DMT400024511	Potato	peroxisome, plastid	52.4	59.73
KRH49582	Soybean	mitochondrion	40.14	58.6
AT1G35910.1	Thale cress	plastid	51.92	58.54
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	44.95	58.44
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.92	58.22
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.2	57.26
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.16	57.11
KRH30218	Soybean	plastid	29.33	57.01
TraesCS2A01G161100.1	Wheat	cytosol, plastid	49.04	56.98
TraesCS2A01G161000.1	Wheat	plastid	48.56	56.58
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	50.72	55.67
TraesCS2A01G161200.1	Wheat	cytosol, plastid	47.84	55.59
CDY14635	Canola	plastid	50.0	55.17
Bra015631.1-P	Field mustard	plastid	50.0	55.03
CDX87477	Canola	plastid	50.0	55.03
Bra008344.1-P	Field mustard	plastid	49.76	54.91
CDX88416	Canola	plastid	49.76	54.76
CDY26848	Canola	plastid	49.76	54.62
AT1G78090.1	Thale cress	plastid	48.56	54.01
TraesCS2A01G167100.1	Wheat	nucleus, peroxisome, plastid	29.57	49.4
TraesCS2A01G412100.1	Wheat	plastid	43.51	48.92
TraesCS6A01G248400.1	Wheat	cytosol, plastid	43.51	48.66
TraesCS1A01G210400.1	Wheat	plastid	43.51	47.51
CDY37091	Canola	plastid	22.84	36.54
Bra034400.1-P	Field mustard	plastid	22.84	36.54
TraesCS3A01G085700.1	Wheat	vacuole	32.45	24.41
TraesCS2A01G167200.1	Wheat	extracellular	3.85	6.08

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF10
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS6A01G301800	EnsemblPlants:TraesCS6A01G301800.1	InterPro:Trehalose_PPase
TIGR:cd01627	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:535152295..535154638

Molecular Weight (calculated)

45369.6 Da

IEP (calculated)

9.494

GRAVY (calculated)

-0.305

Length

416 amino acids

Sequence
(BLAST)

001: MTTSQDVVVS EMGIGAGGAA MPGSGAAGLF ACRSAASAGA MSMRQTYRDL AAAAARSANC TWAELEAMRA ASPTRSRPGA DVDELTAWMR KHPSALGKFE
101: QIASASKGKK IVMFLDYDGT LSPIVANPDA AYMSDAMREA VRDVAKHFPT AIVSGRCRDK VHNFVGLSEL YYAGSHGMDI QGPGSNPESV LCQPASEFLP
201: MIDEVYKVLV EKTKSTPGAK VENNKFCLSV HFRCVDEKRW NFLAEQVKAV IKDYPMLKLT QGRKVFELRP SIMWDKGKAL EFLLESLGFA SCSDVLPVYI
301: GDDRTDEDAF KVLRKRGQGV GILVSKCAKE TSASYSLQDP AEVMEFLLRL VEWKRRSSAA APPMVRPRVQ PRPAAGGTDP RRRSGRPPVN PARRDRCPVV
401: PTPPHPHPTP PRPNFL

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.