Factsheet for Zm00001d052227_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30780	Sorghum	cytosol	94.94	90.86
TraesCS6D01G281100.1	Wheat	plastid	86.52	83.47
Os02t0753000-01	Rice	cytosol	85.96	83.38
Zm00001d018082_P001	Maize	cytosol	91.29	81.66
HORVU6Hr1G074960.2	Barley	cytosol	85.39	81.07
TraesCS6B01G330900.1	Wheat	cytosol	86.24	75.43
TraesCS6A01G301800.1	Wheat	cytosol, nucleus, peroxisome, plastid	87.08	74.52
CDY26849	Canola	mitochondrion	43.82	66.95
Zm00001d032298_P002	Maize	plastid	67.42	64.52
VIT_18s0001g05300.t01	Wine grape	plastid	65.73	62.4
Solyc04g072920.2.1	Tomato	extracellular	62.64	61.1
Zm00001d006913_P002	Maize	plastid	56.18	60.79
PGSC0003DMT400024511	Potato	peroxisome, plastid	61.52	60.0
Zm00001d005658_P001	Maize	plastid	64.04	59.38
Zm00001d020272_P001	Maize	peroxisome, plastid	65.73	58.65
KRH49582	Soybean	mitochondrion	46.35	57.89
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	51.97	57.81
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	60.39	57.8
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	60.11	57.68
KRH30218	Soybean	plastid	34.55	57.48
AT1G35910.1	Thale cress	plastid	59.55	57.45
Bra008344.1-P	Field mustard	plastid	59.83	56.5
CDY14635	Canola	plastid	59.55	56.23
CDY26848	Canola	plastid	59.83	56.2
CDX87477	Canola	plastid	59.55	56.08
Bra015631.1-P	Field mustard	plastid	59.55	56.08
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	59.83	56.05
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	59.55	55.94
AT1G78090.1	Thale cress	plastid	58.71	55.88
CDX88416	Canola	plastid	59.27	55.82
Zm00001d029371_P001	Maize	cytosol	56.46	55.22
Zm00001d022193_P001	Maize	cytosol	58.15	54.47
Zm00001d022192_P002	Maize	plastid	56.46	54.32
Zm00001d044854_P001	Maize	cytosol	61.52	51.05
Zm00001d006375_P001	Maize	cytosol	50.0	47.21
Zm00001d047110_P001	Maize	cytosol	49.72	46.46
Zm00001d017502_P002	Maize	extracellular	44.94	36.12
Bra034400.1-P	Field mustard	plastid	26.12	35.77
CDY37091	Canola	plastid	26.12	35.77
Zm00001d052226_P001	Maize	cytosol	9.27	31.43

Protein Annotations

EntrezGene:100381600	MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	ProteinID:AQK56502.1	EMBL:BT061724
UniProt:C0HHB8	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF10	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI000189D69A
EnsemblPlantsGene:Zm00001d052227	EnsemblPlants:Zm00001d052227_P001	EnsemblPlants:Zm00001d052227_T001	SEG:seg	:	:

Description

trehalose-6-phosphate phosphatase4 trehalose-6-phosphate phosphatase4

Coordinates

chr4:-:183819885..183822900

Molecular Weight (calculated)

38762.6 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.152

Length

356 amino acids

Sequence
(BLAST)

001: MTNQDVVVSE MGIAAGTALP GSSPALLACR GAAAGAMSLR YLDLAAAAAR SASCTWVEAM RASSPTRSRA AADVDELTAW MRKHPSALGK FEQIASASQG
101: KKVVMFLDYD GTLAPIVADP DAAYMSDVMR AAVRDVAKHF PTAIVSGRCR DKVRSFVDLS ELYYAGSHGM DIEGPSSNPE SVLCQPASEF LPVIDEVYKA
201: LVEKTKSTPG AKVENNKFCL SVHFRCVDEK RWNALAEQVK AVIKDYPKLK LTQGRKVLEI RPSIMWDKGK ALEFLLESLG FASCSDALPV YIGDDRTDED
301: AFKVLRKRGQ GVGILVSKCP KETNASYSLQ DPGEVMDFLL RLVEWKRKST TTRPPV

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.