Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G78090.1 | Thale cress | plastid | 68.75 | 58.82 |
| KRH30218 | Soybean | plastid | 37.5 | 56.07 |
| AT4G39770.1 | Thale cress | cytosol | 60.62 | 55.59 |
| KRH49582 | Soybean | mitochondrion | 48.44 | 54.39 |
| VIT_18s0001g05300.t01 | Wine grape | plastid | 62.81 | 53.6 |
| Os03t0386500-01 | Rice | cytosol, extracellular, peroxisome | 51.56 | 53.23 |
| AT2G22190.1 | Thale cress | cytosol, nucleus, peroxisome | 58.44 | 52.82 |
| KRH62370 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 60.94 | 52.56 |
| Zm00001d006913_P002 | Maize | plastid | 53.75 | 52.28 |
| GSMUA_Achr2P22170_001 | Banana | cytoskeleton, cytosol, peroxisome | 54.06 | 52.11 |
| AT1G35910.1 | Thale cress | plastid | 60.0 | 52.03 |
| Zm00001d052227_P001 | Maize | cytosol | 57.81 | 51.97 |
| KRH18894 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 60.0 | 51.61 |
| KRH53087 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 60.62 | 51.05 |
| AT5G65140.1 | Thale cress | plastid | 58.75 | 50.81 |
| TraesCS6D01G281100.1 | Wheat | plastid | 58.44 | 50.68 |
| GSMUA_Achr2P14790_001 | Banana | cytosol | 58.75 | 50.54 |
| Os02t0753000-01 | Rice | cytosol | 57.81 | 50.41 |
| KRH16701 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 59.69 | 50.4 |
| KXG30780 | Sorghum | cytosol | 58.44 | 50.27 |
| TraesCS2A01G161000.1 | Wheat | plastid | 55.94 | 50.14 |
| GSMUA_Achr4P24170_001 | Banana | cytosol | 60.0 | 50.0 |
| TraesCS2B01G187100.1 | Wheat | cytosol, plastid | 55.62 | 49.72 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 52.5 | 49.41 |
| HORVU6Hr1G074960.2 | Barley | cytosol | 57.81 | 49.33 |
| Zm00001d032298_P002 | Maize | plastid | 57.19 | 49.19 |
| TraesCS2D01G168200.1 | Wheat | cytosol, plastid | 55.0 | 49.16 |
| EER97568 | Sorghum | cytosol, plastid | 54.38 | 49.01 |
| EES13815 | Sorghum | peroxisome | 57.5 | 48.94 |
| TraesCS2B01G187200.1 | Wheat | cytosol, plastid | 54.69 | 48.88 |
| TraesCS2A01G161200.1 | Wheat | cytosol, plastid | 54.69 | 48.88 |
| EER97569 | Sorghum | cytosol, plastid | 54.06 | 48.87 |
| TraesCS7D01G182600.1 | Wheat | peroxisome, plastid | 55.31 | 48.76 |
| Os08t0409100-01 | Rice | peroxisome | 56.25 | 48.65 |
| HORVU7Hr1G037140.1 | Barley | plastid | 55.0 | 48.62 |
| TraesCS2A01G161100.1 | Wheat | cytosol, plastid | 54.38 | 48.6 |
| AT5G10100.1 | Thale cress | plastid | 57.5 | 48.42 |
| TraesCS5D01G200800.1 | Wheat | plastid | 56.25 | 48.26 |
| TraesCS5A01G190000.1 | Wheat | plastid | 56.25 | 48.26 |
| TraesCS7A01G180800.1 | Wheat | peroxisome, plastid | 54.06 | 47.92 |
| EER96661 | Sorghum | plastid | 56.88 | 47.77 |
| TraesCS2D01G168100.1 | Wheat | cytosol, plastid | 53.44 | 47.77 |
| TraesCS7B01G085800.1 | Wheat | peroxisome, plastid | 54.06 | 47.53 |
| TraesCS2B01G187000.1 | Wheat | peroxisome, plastid | 53.12 | 47.49 |
| Os09t0369400-01 | Rice | plastid | 55.62 | 47.47 |
| GSMUA_Achr7P11700_001 | Banana | plastid | 56.56 | 47.14 |
| Zm00001d005658_P001 | Maize | plastid | 56.56 | 47.14 |
| GSMUA_Achr3P01660_001 | Banana | cytosol, mitochondrion, plastid | 57.19 | 47.04 |
| Zm00001d020272_P001 | Maize | peroxisome, plastid | 58.12 | 46.62 |
| Zm00001d029371_P001 | Maize | cytosol | 52.81 | 46.43 |
| EER94771 | Sorghum | cytosol, peroxisome, plastid | 53.12 | 46.32 |
| Zm00001d018082_P001 | Maize | cytosol | 57.5 | 46.23 |
| Zm00001d022192_P002 | Maize | plastid | 53.44 | 46.22 |
| TraesCS6B01G330900.1 | Wheat | cytosol | 58.75 | 46.19 |
| KXG36741 | Sorghum | cytosol | 52.5 | 46.15 |
| Zm00001d022193_P001 | Maize | cytosol | 54.38 | 45.79 |
| Os07t0624600-01 | Rice | cytosol | 52.19 | 45.63 |
| TraesCS6A01G301800.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.44 | 44.95 |
| TraesCS2D01G168300.1 | Wheat | peroxisome, plastid | 54.69 | 44.64 |
| KXG19623 | Sorghum | cytosol | 53.75 | 44.44 |
| TraesCS5B01G193100.2 | Wheat | plastid | 56.25 | 43.37 |
| AT4G12430.1 | Thale cress | plastid | 49.38 | 42.93 |
| AT4G22590.1 | Thale cress | plastid | 50.0 | 42.44 |
| HORVU2Hr1G029290.1 | Barley | golgi, mitochondrion, peroxisome, plastid | 53.44 | 42.22 |
| HORVU5Hr1G058300.1 | Barley | plastid | 56.25 | 42.15 |
| AT5G51460.3 | Thale cress | nucleus, plastid | 50.62 | 42.08 |
| Zm00001d044854_P001 | Maize | cytosol | 48.44 | 36.13 |
| HORVU1Hr1G061580.4 | Barley | plastid | 22.5 | 35.47 |
| HORVU6Hr1G066240.1 | Barley | plastid | 11.56 | 25.52 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | EntrezGene:838826 | ProteinID:AAF87852.1 | ProteinID:AEE30212.1 |
| ArrayExpress:AT1G22210 | EnsemblPlantsGene:AT1G22210 | RefSeq:AT1G22210 | TAIR:AT1G22210 | RefSeq:AT1G22210-TAIR-G | EnsemblPlants:AT1G22210.1 |
| TAIR:AT1G22210.1 | Unigene:At.41617 | UniProt:F4I1A6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004805 |
| GO:GO:0005975 | GO:GO:0005992 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016311 | GO:GO:0016787 | InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 |
| RefSeq:NP_173640.1 | PFAM:PF02358 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020090 | PO:PO:0020100 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF16 | SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 |
| TIGRFAMs:TIGR01484 | Symbol:TPPC | InterPro:Trehalose_PPase | UniParc:UPI00000482A4 | : | : |
Description
TPPCProbable trehalose-phosphate phosphatase C [Source:UniProtKB/Swiss-Prot;Acc:F4I1A6]
Coordinates
chr1:+:7841432..7844056
Molecular Weight (calculated)
36365.4 Da
IEP (calculated)
5.071
GRAVY (calculated)
-0.398
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MKITDISGKI ETLVDSLRDM SPTRVRSSFS DEHVSENDDE RSSWIALHPS ALDMFEQIMR DAEGKQIIMF LDYDGTLSLI TEDHDRAYIT DEMREVVKEV
101: ATYFKTAIIS GRSTDKVQSF VKLTGIHYAG SHGMDIKGPT NTDQSNQEEV MFQPASDYLP MIDEVVNVLK EKTKSIPGAT VEHNKFCLTV HFRRVDETGW
201: AALAEQVRLV LIDYPKLRLT QGRKVLELRP SIKWDKGKAL EFLLNSLGIA ESKDVLPVYI GDDRTDEDAF KVLCERGQGF GIIVSKTIKE TYASYSLQDP
301: SQVKEFLERL VKWKKQTLGE
101: ATYFKTAIIS GRSTDKVQSF VKLTGIHYAG SHGMDIKGPT NTDQSNQEEV MFQPASDYLP MIDEVVNVLK EKTKSIPGAT VEHNKFCLTV HFRRVDETGW
201: AALAEQVRLV LIDYPKLRLT QGRKVLELRP SIKWDKGKAL EFLLNSLGIA ESKDVLPVYI GDDRTDEDAF KVLCERGQGF GIIVSKTIKE TYASYSLQDP
301: SQVKEFLERL VKWKKQTLGE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.