Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G180800.1 | Wheat | peroxisome, plastid | 95.59 | 96.12 |
| TraesCS7B01G085800.1 | Wheat | peroxisome, plastid | 95.32 | 95.05 |
| HORVU7Hr1G037140.1 | Barley | plastid | 94.21 | 94.48 |
| KXG19623 | Sorghum | cytosol | 72.45 | 67.96 |
| TraesCS6D01G281100.1 | Wheat | plastid | 68.04 | 66.94 |
| CDY26849 | Canola | mitochondrion | 39.39 | 61.37 |
| KRH49582 | Soybean | mitochondrion | 45.45 | 57.89 |
| Solyc04g072920.2.1 | Tomato | extracellular | 56.47 | 56.16 |
| KRH30218 | Soybean | plastid | 33.06 | 56.07 |
| KRH62370 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 57.3 | 56.06 |
| Zm00001d044854_P001 | Maize | cytosol | 66.12 | 55.94 |
| TraesCS5D01G200800.1 | Wheat | plastid | 57.3 | 55.76 |
| VIT_18s0001g05300.t01 | Wine grape | plastid | 57.58 | 55.73 |
| PGSC0003DMT400024511 | Potato | peroxisome, plastid | 55.92 | 55.62 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 48.76 | 55.31 |
| Bra015631.1-P | Field mustard | plastid | 56.75 | 54.5 |
| CDX88416 | Canola | plastid | 56.47 | 54.23 |
| AT1G78090.1 | Thale cress | plastid | 55.65 | 54.01 |
| CDX87477 | Canola | plastid | 56.2 | 53.97 |
| TraesCS2D01G168200.1 | Wheat | cytosol, plastid | 53.17 | 53.91 |
| TraesCS2D01G168100.1 | Wheat | cytosol, plastid | 53.17 | 53.91 |
| KRH18894 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 55.1 | 53.76 |
| KRH53087 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 56.2 | 53.68 |
| CDY14635 | Canola | plastid | 55.37 | 53.32 |
| Bra008344.1-P | Field mustard | plastid | 55.37 | 53.32 |
| AT1G35910.1 | Thale cress | plastid | 53.99 | 53.12 |
| CDY26848 | Canola | plastid | 55.37 | 53.03 |
| KRH16701 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 54.27 | 51.98 |
| TraesCS2D01G168300.1 | Wheat | peroxisome, plastid | 53.44 | 49.49 |
| TraesCS6D01G230500.1 | Wheat | cytosol, plastid | 49.86 | 48.66 |
| TraesCS2D01G409300.1 | Wheat | plastid | 48.76 | 47.84 |
| TraesCS1D01G213700.1 | Wheat | plastid | 48.21 | 45.93 |
| CDY37091 | Canola | plastid | 24.52 | 34.23 |
| Bra034400.1-P | Field mustard | plastid | 24.52 | 34.23 |
| TraesCS3D01G085800.1 | Wheat | mitochondrion | 33.06 | 20.55 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0005992 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HAD-SF_hydro_IIB |
| InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF02358 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF10 |
| SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | EnsemblPlantsGene:TraesCS7D01G182600 | EnsemblPlants:TraesCS7D01G182600.1 | InterPro:Trehalose_PPase |
| TIGR:cd01627 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:136013473..136015521
Molecular Weight (calculated)
39909.7 Da
IEP (calculated)
8.464
GRAVY (calculated)
-0.268
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MANQDVVLRP DMGGIASAAA MPGSSSRPIF ACRGAASTSL RRRSGVDDDY GARSPCATSW VVQAMRASSP ARSAAVDEYA AWTRKHPSAL ASFEQIAASA
101: KGKQVVVFLD YDGTLSPIVA DPDTAFITGE MREAVRGVAK HFPAAIVTGR CVEKVCSFVG LSELYYAGSH GMDIKGPGSN AEEVLLQPAR EFLPVIAEVY
201: EALVEKTKST PGARVENNKF CLSVHFRCVD EKRWSPLAEQ VKEVLRDYPD LRLNEGRKVL EIRPSIMWDK GKAVEFLLQS LGFDGRSDVL PLYLGDDRTD
301: EDAFKMLRKR GHGLGILVSK CPRETDASYS LQDPTEVMEF LHRLVQWKRR RSSSSSSAMR ARV
101: KGKQVVVFLD YDGTLSPIVA DPDTAFITGE MREAVRGVAK HFPAAIVTGR CVEKVCSFVG LSELYYAGSH GMDIKGPGSN AEEVLLQPAR EFLPVIAEVY
201: EALVEKTKST PGARVENNKF CLSVHFRCVD EKRWSPLAEQ VKEVLRDYPD LRLNEGRKVL EIRPSIMWDK GKAVEFLLQS LGFDGRSDVL PLYLGDDRTD
301: EDAFKMLRKR GHGLGILVSK CPRETDASYS LQDPTEVMEF LHRLVQWKRR RSSSSSSAMR ARV
001: MTNQNVIVSD RKPILGLKTI TVSVSNSPLF SNSFPTYFNF PRRKLLKLLE AADKNNLVVA PKITSMIDSM RDSSPTRLRS SSYDSVSDND DKTSWIVRFP
101: SALNMFDEIV NAAKGKQIVM FLDYDGTLSP IVEDPDKAFI THEMREVVKD VASNFPTAIV TGRSIEKVRS FVQVNEIYYA GSHGMDIEGP TNENSNGQSN
201: ERVLFQPARE FLPMIEKVVN ILEEKTKWIP GAMVENNKFC LSVHFRRVDE KRWPALAEVV KSVLIDYPKL KLTQGRKVLE IRPTIKWDKG QALNFLLKSL
301: GYENSDDVVP VYIGDDRTDE DAFKVLRERG QGFGILVSKV PKDTNASYSL QDPSQVNKFL ERLVEWKRKT VGEE
101: SALNMFDEIV NAAKGKQIVM FLDYDGTLSP IVEDPDKAFI THEMREVVKD VASNFPTAIV TGRSIEKVRS FVQVNEIYYA GSHGMDIEGP TNENSNGQSN
201: ERVLFQPARE FLPMIEKVVN ILEEKTKWIP GAMVENNKFC LSVHFRRVDE KRWPALAEVV KSVLIDYPKL KLTQGRKVLE IRPTIKWDKG QALNFLLKSL
301: GYENSDDVVP VYIGDDRTDE DAFKVLRERG QGFGILVSKV PKDTNASYSL QDPSQVNKFL ERLVEWKRKT VGEE
Arabidopsis Description
TPPBTrehalose-phosphate phosphatase B [Source:UniProtKB/Swiss-Prot;Acc:Q9C9S4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.