Factsheet for TraesCS3D01G085800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G015310.1	Barley	extracellular	34.25	78.43
TraesCS2B01G193300.1	Wheat	plasma membrane	43.49	45.44
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	19.86	42.65
TraesCS6D01G281100.1	Wheat	plastid	22.95	36.31
TraesCS6D01G230500.1	Wheat	cytosol, plastid	23.12	36.29
TraesCS1D01G213700.1	Wheat	plastid	23.46	35.96
TraesCS2D01G168200.1	Wheat	cytosol, plastid	21.4	34.92
TraesCS5D01G200800.1	Wheat	plastid	22.26	34.85
TraesCS2D01G168100.1	Wheat	cytosol, plastid	21.23	34.64
TraesCS2D01G409300.1	Wheat	plastid	21.23	33.51
TraesCS7D01G182600.1	Wheat	peroxisome, plastid	20.55	33.06
TraesCS2D01G168300.1	Wheat	peroxisome, plastid	21.92	32.65

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.430.20	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	ncoils:Coil	InterPro:GNK2
InterPro:GNK2_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR002902	InterPro:IPR023214	InterPro:IPR038408	PFAM:PF01657	PFAM:PF02358	PFscan:PS51473
PANTHER:PTHR43768	PANTHER:PTHR43768:SF11	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3D01G085800	EnsemblPlants:TraesCS3D01G085800.1	InterPro:Trehalose_PPase	TIGR:cd01627	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:43259228..43283714

Molecular Weight (calculated)

65025.6 Da

IEP (calculated)

8.791

GRAVY (calculated)

-0.400

Length

584 amino acids

Sequence
(BLAST)

001: MQSFLRVCEL GLHRTVRAGT YSSPRRGVTR GGGAYRGRAQ MDMQMYRGHA VVAALVLLTT VTAASPTGYW GYLCDGGNYS APSKYQQNLE QLSATLPEAV
101: ASSPSLFHTQ AVGSSQDRAY ALARCRGDTE ADDCKRCLTQ AFKDVRAVCT FRKGISIYYD TCSLWFAEKI KIHLGDLQSV LRADGPPIPT QCKAFQNDAS
201: TLIADVARKA SYSSQRHATG EKGRDERACN YTLYTLADCL PGISAAQCQV CLEDLTSTPG LSGGQMGERK ATLLCSYRLE PYQFFRDTKD SSKQHDTIIA
301: AKAAFAKPFF MEAKHPSAID SFNKITTNWQ GKTIALFLDY DGTLAPKVDN PDEAYMSSEM REVVQELASL CATSVVSGRA RDKAENFVMI ENLHYAGNHG
401: AEIKLINETE AYEPAREYVP VINQARERLE EAIKEIKGAS IEHKKFGISV HYRCVEKEER ELVKKLAKQT IKGFSELTVT KGDKVVEVRP KAEFNKGFAV
501: KYILEQLARK NNWDSSQVVA IFIGDDKTDE DAFKVLRKRV GGLGILVNKK RKWTKASYSL EDPVQVQKFL QMLVNWKKKA EAEV

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.