CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 2
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, secretory
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G167100.1	Wheat	nucleus, peroxisome, plastid	37.5	40.96
OQU85690	Sorghum	nucleus, plastid	51.84	38.11
OQU89957	Sorghum	cytosol	44.49	38.05
EER97568	Sorghum	cytosol, plastid	47.79	36.62
EER97569	Sorghum	cytosol, plastid	47.06	36.16
KXG36741	Sorghum	cytosol	47.43	35.44
KXG30780	Sorghum	cytosol	48.16	35.22
EER91963	Sorghum	cytosol	49.26	35.08
EES13815	Sorghum	peroxisome	48.16	34.84
EER96661	Sorghum	plastid	47.43	33.86
EER94771	Sorghum	cytosol, peroxisome, plastid	44.85	33.24
KXG19623	Sorghum	cytosol	46.32	32.56
OQU89414	Sorghum	cytosol	15.07	24.26
TraesCS3A01G085700.1	Wheat	vacuole	43.38	21.34
TraesCS3D01G085800.1	Wheat	mitochondrion	42.65	19.86
TraesCS2B01G193300.1	Wheat	plasma membrane	38.97	18.96
TraesCS2A01G167200.1	Wheat	extracellular	2.21	2.28
HORVU3Hr1G015310.1	Barley	extracellular	1.47	1.57

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	UniProt:A0A1Z5R5A7	GO:GO:0003674	GO:GO:0003824
GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	EnsemblPlants:OQU78907	ProteinID:OQU78907	ProteinID:OQU78907.1	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF11	EnsemblPlantsGene:SORBI_3008G070200	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase
UniParc:UPI000B8B9F78	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:9009556..9014472

Molecular Weight (calculated)

30706.8 Da

IEP (calculated)

6.260

GRAVY (calculated)

-0.233

Length

272 amino acids

Sequence
(BLAST)

001: VVPCPSALEA FEEIIGLANN NEIAVFLDYD GTLSPIVNDP EKAYMSSEMR QVLKAIAENF KTSIVSGRAR EKVFEFVQID TINYAGSHGT DIKMASTTWG
101: EITEEHDSYQ PAKKFATVMN QVYNSLVRET GHINGAKVEN NTYCVSVHYR NVAKEDQLRV LHVVQEVLKN LNSGLDLTYG HMVYEIRPPL AFNKGNAVAY
201: ILDKLGLDFS IYIGDDLTDE DAFKVIRDRK KGIRILVSNT SRETSAFYSL KDPPQVMEFL KLLLSWKLKK IK

Best Arabidopsis Sequence Match ( AT2G22190.1 )
(BLAST)

001: MVRFIEENIT KMLETKAISN SEVLYVGGDD GDTSPTTKVL HDFQINSGGG LIRSWVDSMR ACSPTRPKSF NSQSCWIKEH PSALNMFEEI LHKSEGKQIV
101: MFLDYDGTLS PIVDDPDRAF MSKKMRNTVR KLAKCFPTAI VSGRCREKVS SFVKLTELYY AGSHGMDIKG PEQGSKYKKE NQSLLCQPAT EFLPVINEVY
201: KKLVENTQSI PGAKVENNKF CASVHFRCVE ENKWSDLAHQ VRSVLKNYPK LMLTQGRKVL EIRPIIKWDK GKALEFLLES LGYDNCTDVF PIYIGDDRTD
301: EDAFKILRDK KQGLGILVSK YAKETNASYS LQEPDEVMVF LERLVEWKQS RCGA

Arabidopsis Description

TPPEProbable trehalose-phosphate phosphatase E [Source:UniProtKB/Swiss-Prot;Acc:Q67X99]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.