CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
peroxisome 1
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97568	Sorghum	cytosol, plastid	96.05	95.77
Zm00001d006913_P002	Maize	plastid	83.9	90.27
Zm00001d022192_P002	Maize	plastid	90.96	87.03
TraesCS2B01G187100.1	Wheat	cytosol, plastid	70.9	70.11
TraesCS2A01G161000.1	Wheat	plastid	70.62	70.03
TraesCS2A01G161100.1	Wheat	cytosol, plastid	70.34	69.55
TraesCS2D01G168200.1	Wheat	cytosol, plastid	69.77	68.99
TraesCS2D01G168100.1	Wheat	cytosol, plastid	69.21	68.44
TraesCS2B01G187200.1	Wheat	cytosol, plastid	69.21	68.44
TraesCS2B01G187000.1	Wheat	peroxisome, plastid	68.36	67.6
TraesCS2A01G161200.1	Wheat	cytosol, plastid	68.36	67.6
Os07t0624600-01	Rice	cytosol	67.23	65.03
KXG36741	Sorghum	cytosol	66.67	64.84
TraesCS2D01G168300.1	Wheat	peroxisome, plastid	69.77	63.01
HORVU2Hr1G029290.1	Barley	golgi, mitochondrion, peroxisome, plastid	70.34	61.48
KRH30218	Soybean	plastid	37.01	61.22
CDY26849	Canola	mitochondrion	39.55	60.09
EER94771	Sorghum	cytosol, peroxisome, plastid	61.86	59.67
KRH49582	Soybean	mitochondrion	47.74	59.3
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	55.37	59.04
VIT_18s0001g05300.t01	Wine grape	plastid	60.45	57.07
GSMUA_Achr10P...	Banana	cytosol, plastid	54.8	57.06
EES13815	Sorghum	peroxisome	59.89	56.38
GSMUA_Achr2P14790_001	Banana	cytosol	59.04	56.18
EER96661	Sorghum	plastid	60.17	55.91
KXG30780	Sorghum	cytosol	58.47	55.65
GSMUA_Achr7P11700_001	Banana	plastid	60.17	55.47
GSMUA_Achr4P24170_001	Banana	cytosol	59.89	55.21
Solyc04g072920.2.1	Tomato	extracellular	56.21	54.52
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	48.87	54.06
PGSC0003DMT400024511	Potato	peroxisome, plastid	55.65	53.97
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.5	53.91
AT1G35910.1	Thale cress	plastid	55.93	53.66
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.21	53.49
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.5	52.63
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	55.93	52.24
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	56.21	51.16
Bra008344.1-P	Field mustard	plastid	53.67	50.4
CDY26848	Canola	plastid	53.67	50.13
CDY14635	Canola	plastid	53.11	49.87
KXG19623	Sorghum	cytosol	54.24	49.61
Bra015631.1-P	Field mustard	plastid	52.82	49.47
CDX88416	Canola	plastid	52.54	49.21
CDX87477	Canola	plastid	52.54	49.21
AT1G78090.1	Thale cress	plastid	51.13	48.4
OQU89957	Sorghum	cytosol	43.22	48.11
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	36.16	47.06
OQU85690	Sorghum	nucleus, plastid	48.02	45.95
EER91963	Sorghum	cytosol	48.02	44.5
OQU89414	Sorghum	cytosol	19.21	40.24
CDY37091	Canola	plastid	25.42	34.62
Bra034400.1-P	Field mustard	plastid	25.42	34.62

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EntrezGene:8063494	UniProt:C5X2J4	EnsemblPlants:EER97569
ProteinID:EER97569	ProteinID:EER97569.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358
PANTHER:PTHR43768	PANTHER:PTHR43768:SF7	EnsemblPlantsGene:SORBI_3002G381500	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484
InterPro:Trehalose_PPase	UniParc:UPI0001A8399E	RefSeq:XP_002461048.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:73786624..73790284

Molecular Weight (calculated)

38944.4 Da

IEP (calculated)

7.908

GRAVY (calculated)

-0.322

Length

354 amino acids

Sequence
(BLAST)

001: MTKHTAFAAD DAITAAAGVT SPQPGRRFTS YPPPTRARGG CRLAAAAARQ ATDPGAAGVA AGSWPELVPR HADFDDWMEK HPSALAEFES VLATAKGKQI
101: VMFLDYDGTL TPIVKDPDSA VMSEEMRDAV RGVAEHFPTA IVSGRCRDKV FNFVKLAELY YAGSHGMDIK GPTAQSKHTK AKAEAVLCQP ASAFLPVIDE
201: VYRTLTARTA PIPGATVENN KFCLSVHFRC VQEEKWRALE EQVRSVLKEY PDLRLTKGRK VLEIRPSIEW DKGNALQFLL ESLGFADSND NVFPIYIGDD
301: RTDEDAFKVL RSMGQGIGIL VSKIPKETAA SYSLREPSEV KEFLRKLVRS KQRD

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.