Factsheet for GSMUA_Achr3P01660_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, plastid	65.55	75.0
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	63.24	74.1
GSMUA_Achr2P14790_001	Banana	cytosol	62.21	65.05
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	46.02	64.39
GSMUA_AchrUn_...	Banana	peroxisome	59.9	62.47
GSMUA_Achr6P30350_001	Banana	plastid	57.07	62.01
CDY26849	Canola	mitochondrion	37.02	61.8
KRH30218	Soybean	plastid	33.93	61.68
GSMUA_Achr4P24170_001	Banana	cytosol	60.67	61.46
GSMUA_Achr7P11700_001	Banana	plastid	59.64	60.42
VIT_18s0001g05300.t01	Wine grape	plastid	57.58	59.73
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.81	59.57
Zm00001d006913_P002	Maize	plastid	49.87	58.97
GSMUA_Achr10P...	Banana	plastid	55.78	58.65
KRH49582	Soybean	mitochondrion	42.93	58.6
Solyc04g072920.2.1	Tomato	extracellular	54.76	58.36
GSMUA_Achr10P...	Banana	plastid	60.41	58.17
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	55.78	57.87
Os03t0386500-01	Rice	cytosol, extracellular, peroxisome	46.02	57.74
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.04	57.37
PGSC0003DMT400024511	Potato	peroxisome, plastid	53.73	57.26
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	47.04	57.19
TraesCS2A01G161000.1	Wheat	plastid	52.44	57.14
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	54.24	56.72
TraesCS2B01G187100.1	Wheat	cytosol, plastid	52.19	56.7
EER97568	Sorghum	cytosol, plastid	51.67	56.62
AT1G35910.1	Thale cress	plastid	53.47	56.37
EER97569	Sorghum	cytosol, plastid	51.16	56.21
TraesCS2A01G161100.1	Wheat	cytosol, plastid	51.41	55.87
TraesCS2A01G161200.1	Wheat	cytosol, plastid	51.41	55.87
TraesCS2B01G187200.1	Wheat	cytosol, plastid	51.41	55.87
Bra015631.1-P	Field mustard	plastid	54.24	55.82
Bra008344.1-P	Field mustard	plastid	53.98	55.7
TraesCS2D01G168200.1	Wheat	cytosol, plastid	51.16	55.59
CDX87477	Canola	plastid	53.98	55.56
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	53.98	55.41
CDY14635	Canola	plastid	53.47	55.17
CDY26848	Canola	plastid	53.73	55.15
CDX88416	Canola	plastid	53.47	55.03
AT1G78090.1	Thale cress	plastid	52.7	54.81
TraesCS2B01G187000.1	Wheat	peroxisome, plastid	50.39	54.75
TraesCS2D01G168100.1	Wheat	cytosol, plastid	50.13	54.47
EER94771	Sorghum	cytosol, peroxisome, plastid	50.9	53.95
Zm00001d029371_P001	Maize	cytosol	50.39	53.85
KXG36741	Sorghum	cytosol	50.13	53.57
Zm00001d022192_P002	Maize	plastid	50.9	53.51
Os07t0624600-01	Rice	cytosol	49.1	52.19
TraesCS2D01G168300.1	Wheat	peroxisome, plastid	51.41	51.02
Zm00001d022193_P001	Maize	cytosol	49.61	50.79
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	44.47	49.01
HORVU2Hr1G029290.1	Barley	golgi, mitochondrion, peroxisome, plastid	50.64	48.64
GSMUA_Achr4P24650_001	Banana	cytosol	44.73	48.2
GSMUA_Achr5P15280_001	Banana	plastid	47.56	46.72
GSMUA_Achr2P18640_001	Banana	cytosol	39.85	46.69
GSMUA_Achr5P13510_001	Banana	plastid	47.3	46.46
GSMUA_Achr1P01710_001	Banana	plastid	47.04	46.21
GSMUA_Achr5P19860_001	Banana	plastid	44.22	45.26
Bra034400.1-P	Field mustard	plastid	23.39	35.0
CDY37091	Canola	plastid	23.39	35.0
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	17.48	30.36

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr3G01660_001	EnsemblPlants:GSMUA_Achr3P01660_001	EnsemblPlants:GSMUA_Achr3T01660_001	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0SAY4	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF1	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002952A78
SEG:seg	:	:	:	:	:

Description

uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G01660_001]

Coordinates

chr3:+:1116969..1118981

Molecular Weight (calculated)

43566.9 Da

IEP (calculated)

10.565

GRAVY (calculated)

-0.275

Length

389 amino acids

Sequence
(BLAST)

001: MMRKQSVIVP EELAVTTVMA VVADPAAHRS ALLQPRSSAL GVRCARYKRF LSQLDMGSGG GGGARISAWV DSMRASSPTH VKAAAMLSAS FAASHDEDYN
101: NRVKQHPSAL SVFEDIVAAS KGKQIVVFLD YDGTLSPIVD DPDRAFISNA MKETVRDVAR HFPTAIVSGR RRDKVFSFVR LRELYYAGSH GMDIKGPTKR
201: TKHTKAKTKA VLFQPATEFL PMIDEVYKAL MEKTKLIQGS RVENNIFTLS VHFRCVDEKI WSSLAELVRS VLKDYPKLRL TMGRKVLEIR PSIKWDKGKA
301: LEFMLESLGL ADSGNVFPVY IGDDRTDEDA FKVLHGRRQG LGILVSEVIR ETSARCSLRQ PAEVQKFLRR LVEWKRSASL PRRTEARKK

Best Arabidopsis Sequence Match ( AT2G22190.1 )
(BLAST)

001: MVRFIEENIT KMLETKAISN SEVLYVGGDD GDTSPTTKVL HDFQINSGGG LIRSWVDSMR ACSPTRPKSF NSQSCWIKEH PSALNMFEEI LHKSEGKQIV
101: MFLDYDGTLS PIVDDPDRAF MSKKMRNTVR KLAKCFPTAI VSGRCREKVS SFVKLTELYY AGSHGMDIKG PEQGSKYKKE NQSLLCQPAT EFLPVINEVY
201: KKLVENTQSI PGAKVENNKF CASVHFRCVE ENKWSDLAHQ VRSVLKNYPK LMLTQGRKVL EIRPIIKWDK GKALEFLLES LGYDNCTDVF PIYIGDDRTD
301: EDAFKILRDK KQGLGILVSK YAKETNASYS LQEPDEVMVF LERLVEWKQS RCGA

Arabidopsis Description

TPPEProbable trehalose-phosphate phosphatase E [Source:UniProtKB/Swiss-Prot;Acc:Q67X99]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.