CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 2
peroxisome 2
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029371_P001	Maize	cytosol	88.56	89.29
Os03t0386500-01	Rice	cytosol, extracellular, peroxisome	62.4	73.87
KXG36741	Sorghum	cytosol	62.13	62.64
EER97568	Sorghum	cytosol, plastid	60.49	62.54
EER97569	Sorghum	cytosol, plastid	59.67	61.86
GSMUA_Achr10P...	Banana	cytosol, plastid	54.77	59.12
KRH30218	Soybean	plastid	34.33	58.88
GSMUA_Achr2P14790_001	Banana	cytosol	59.13	58.33
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	52.59	58.13
EES13815	Sorghum	peroxisome	58.04	56.65
KRH49582	Soybean	mitochondrion	43.87	56.49
GSMUA_Achr7P11700_001	Banana	plastid	58.86	56.25
GSMUA_Achr4P24170_001	Banana	cytosol	58.86	56.25
CDY26849	Canola	mitochondrion	35.69	56.22
VIT_18s0001g05300.t01	Wine grape	plastid	56.95	55.73
KXG30780	Sorghum	cytosol	56.4	55.65
EER96661	Sorghum	plastid	57.77	55.64
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	55.04	54.45
Solyc04g072920.2.1	Tomato	extracellular	53.68	53.97
PGSC0003DMT400024511	Potato	peroxisome, plastid	53.13	53.42
OQU89414	Sorghum	cytosol	24.52	53.25
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	46.32	53.12
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	53.68	52.96
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	54.5	52.63
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	53.41	51.72
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	53.95	50.9
AT1G35910.1	Thale cress	plastid	50.68	50.41
CDX88416	Canola	plastid	51.23	49.74
Bra015631.1-P	Field mustard	plastid	51.23	49.74
KXG19623	Sorghum	cytosol	52.32	49.61
Bra008344.1-P	Field mustard	plastid	50.95	49.6
CDX87477	Canola	plastid	50.95	49.47
AT1G78090.1	Thale cress	plastid	50.41	49.47
CDY26848	Canola	plastid	50.95	49.34
CDY14635	Canola	plastid	50.68	49.34
OQU89957	Sorghum	cytosol	41.96	48.43
EER91963	Sorghum	cytosol	49.05	47.12
OQU85690	Sorghum	nucleus, plastid	46.87	46.49
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	33.24	44.85
CDY37091	Canola	plastid	24.8	35.0
Bra034400.1-P	Field mustard	plastid	24.8	35.0

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	EntrezGene:8077127	UniProt:C5WYJ4	EnsemblPlants:EER94771	ProteinID:EER94771
ProteinID:EER94771.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF8	EnsemblPlantsGene:SORBI_3001G353300	SUPFAM:SSF56784	unigene:Sbi.19855	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484
InterPro:Trehalose_PPase	UniParc:UPI0001A832FB	RefSeq:XP_002467773.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:64288863..64291248

Molecular Weight (calculated)

40069.6 Da

IEP (calculated)

6.253

GRAVY (calculated)

-0.187

Length

367 amino acids

Sequence
(BLAST)

001: MTKHGVVLED VAAARHFSFP PPRTTTPTAG GGDSFRKLAA QVDLGAAVVG SWLDSMKASS PRHRLMAPLP GAADAEHDDW MERHPSALDR FDALAAAAKG
101: KQVAVFLDYD GTLSPIVEDP DRAVMTDEMR EAVRGVAARF PTAIVSGRCR DKVFSFVRLA ELYYAGSHGM DIRGPTADPN HHGKAADSSS SVLCQPASEF
201: LPVMEEVYAA LVSRVEPSIP GAKVENNKFC LSVHFRCVEE AAWAPLFELV RAVLRDYPGL RLTQGRKVLE VRPMIRWDKG KALEFLLTAL GFADADKDDV
301: FPIYVGDDRT DEDAFRVLRA RGQGAGILVS RFPKETSASF TLRDPAEVKD FLRKLVVVNA DADTNNS

Best Arabidopsis Sequence Match ( AT5G65140.1 )
(BLAST)

001: MVSQNVVVSD AKTGIITVST VSNSSVFTPT AQKPPTAPGY ISVSKKKLLK NLEINGADQS QRLNSWVDSM RASSPTHLKS LSSFSSEEEH NSWIKRHPSA
101: LNMFERIIEE ARGKQIVMFL DYDGTLSPIV DDPDRAFMTS KMRRTVKKMA KCFPTSIVTG RCIDKVYSFV KLAELYYAGS HGMDIKGPTK GFSRYNKDKP
201: SVLYQPAGDF LPMIDEVYKQ LVEKTKSTPG AKVENNKFCL SVHFRCVDEK KWSELASKVR SVVKNYPTLK LSQGRKVFEI RPIIKWNKGK ALEFLLESLG
301: FENCNDVFPI YIGDDKTDED AFKLLRGRGQ GFGILVSKFP KDTSASYSLQ DPPEVMNFLG RLVEWKQMQQ

Arabidopsis Description

TPPJProbable trehalose-phosphate phosphatase J [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ05]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.