CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006375_P001	Maize	cytosol	89.62	75.6
Os07t0485000-01	Rice	cytosol, nucleus, peroxisome	77.04	68.25
OQU85690	Sorghum	nucleus, plastid	57.55	49.46
EER91963	Sorghum	cytosol	57.86	48.17
EER96661	Sorghum	plastid	54.4	45.41
OQU78907	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	38.05	44.49
EES13815	Sorghum	peroxisome	52.2	44.15
KXG30780	Sorghum	cytosol	51.57	44.09
KXG36741	Sorghum	cytosol	50.31	43.96
EER97569	Sorghum	cytosol, plastid	48.11	43.22
EER97568	Sorghum	cytosol, plastid	48.11	43.1
EER94771	Sorghum	cytosol, peroxisome, plastid	48.43	41.96
KXG19623	Sorghum	cytosol	48.11	39.53
OQU89414	Sorghum	cytosol	18.24	34.32

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	UniProt:A0A1W0W6D9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	EnsemblPlants:OQU89957
ProteinID:OQU89957	ProteinID:OQU89957.1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF15	EnsemblPlantsGene:SORBI_3002G303900
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	InterPro:Trehalose_PPase	UniParc:UPI0009DC8DC4	:	:

Description

hypothetical protein

Coordinates

chr2:+:67967874..67973180

Molecular Weight (calculated)

35929.2 Da

IEP (calculated)

6.273

GRAVY (calculated)

-0.302

Length

318 amino acids

Sequence
(BLAST)

001: MGSYANGSTR ADDDPPSVEK LKEPAIPLKT MPLHANAWLN DMKISSPTAI RVNIGNNVAF DPIYRAWTKK YPSALNAFEK IVAYGKGKKI ALFLDYDGTL
101: SPIVDEPDHA VMSDQMREVV RSAALHLPTA IISGRSCDKV FDFNKEMKIF QAASEFLPMI DEVFRLLVDK VRGIDGAKVE NNKFCVSVHY RNVNEKDWPL
201: VARCTDDVLK AYPRLRLCHG RKVLEVRPVI DWNKGKAVEF LLDSLGLADS DKVLPIYIGD DRTDEDAFKV LREDKRGFGI LVSSVPKESH ALYSLVDPPE
301: VMDFLKRLVK WKEEEEET

Best Arabidopsis Sequence Match ( AT5G51460.1 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMQL
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.