Factsheet for GSMUA_Achr2P18630_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
peroxisome 1
vacuole 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P19860_001	Banana	plastid	48.66	28.68
GSMUA_Achr2P18640_001	Banana	cytosol	37.5	25.3
GSMUA_Achr4P24650_001	Banana	cytosol	40.62	25.21
VIT_16s0022g00660.t01	Wine grape	plastid	43.3	25.19
KRH39976	Soybean	peroxisome	42.86	24.68
KRH23805	Soybean	cytosol	42.41	24.42
GSMUA_Achr5P15280_001	Banana	plastid	42.86	24.24
GSMUA_Achr5P13510_001	Banana	plastid	42.86	24.24
GSMUA_Achr1P01710_001	Banana	plastid	42.41	23.99
Solyc03g083960.2.1	Tomato	plastid	39.29	23.98
PGSC0003DMT400035990	Potato	peroxisome, plastid	41.07	23.96
AT5G51460.3	Thale cress	nucleus, plastid	40.62	23.64
Os10t0553300-01	Rice	cytosol, nucleus, peroxisome	40.18	23.56
CDY66417	Canola	plastid	39.29	23.22
Zm00001d047110_P001	Maize	cytosol	39.29	23.1
Bra028254.1-P	Field mustard	plastid	39.29	23.04
CDY56658	Canola	plastid	38.84	22.96
CDY00477	Canola	plastid	39.29	22.8
KRH62612	Soybean	cytosol	38.84	22.77
CDX99919	Canola	plastid	39.29	22.74
Bra022549.1-P	Field mustard	cytosol, plastid	38.39	22.69
HORVU2Hr1G104360.2	Barley	cytosol, peroxisome, plastid	29.91	22.64
TraesCS1D01G213700.1	Wheat	plastid	38.39	22.57
TraesCS1A01G210400.1	Wheat	plastid	38.39	22.57
KRH56343	Soybean	cytosol	39.29	22.45
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	27.68	22.3
EER91963	Sorghum	cytosol	37.95	22.25
HORVU1Hr1G053770.2	Barley	plastid	36.61	20.92
GSMUA_Achr6P30350_001	Banana	plastid	31.7	19.83
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	29.02	19.58
GSMUA_Achr10P...	Banana	cytosol, plastid	29.02	19.12
GSMUA_Achr7P11700_001	Banana	plastid	32.59	19.01
TraesCS1B01G224300.2	Wheat	golgi, vacuole	37.05	18.95
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	31.7	18.93
GSMUA_Achr4P24170_001	Banana	cytosol	31.7	18.49
GSMUA_Achr10P...	Banana	plastid	30.36	18.38
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	28.57	18.13
GSMUA_Achr10P...	Banana	plastid	32.59	18.07
GSMUA_Achr2P14790_001	Banana	cytosol	29.91	18.01
GSMUA_AchrUn_...	Banana	peroxisome	29.46	17.69
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	30.36	17.48
HORVU4Hr1G036870.1	Barley	mitochondrion	16.52	17.37
HORVU2Hr1G075440.2	Barley	cytosol	3.12	5.34

Protein Annotations

Gene3D:3.40.50.1000	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005992
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G18630_001	EnsemblPlants:GSMUA_Achr2P18630_001
EnsemblPlants:GSMUA_Achr2T18630_001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0S954	PFAM:PF02358
PANTHER:PTHR43768	PANTHER:PTHR43768:SF6	SUPFAM:SSF56784	InterPro:Trehalose_PPase	UniParc:UPI000296F1AA	SEG:seg

Description

Putative CPuORF23 - conserved peptide uORF-containing transcript, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G18630_001]

Coordinates

chr2:+:18991367..18992498

Molecular Weight (calculated)

25224.4 Da

IEP (calculated)

8.139

GRAVY (calculated)

-0.021

Length

224 amino acids

Sequence
(BLAST)

001: MDLKTGGSTP VLTDPGPLNN SRLSLSSNIK PYSIAAQAHS SSLYSTFPGR KGILRKFDDA HFNGCLPLAL TSFEHIICSG ECKWIALFLD YDGTLPPIVD
101: NPDFAIMHNY DYDCFTLSHM LVAVKNASKY FPTAIISRRS REKLYKFVKL TGLYYAGSHA MDIIGPVKKD NIEDGHPNHT ITTDKLVRDI PFLHIQILKP
201: FVVNFFCTLY LLFNYQTSFC HFAT

Best Arabidopsis Sequence Match ( AT5G51460.2 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMLK
101: YPSALTSFEK IMSFAKGKRI ALFLDYDGTL SPIVEEPDCA YMSSAMRSAV QNVAKYFPTA IISGRSRDKV YEFVNLSELY YAGSHGMDIM SPAGESLNHE
201: HSRTVSVYEQ GKDVNLFQPA SEFLPMIDKV LCSLIESTKD IKGVKVEDNK FCISVHYRNV EEKNWTLVAQ CVDDVIRTYP KLRLTHGRKV LEIRPVIDWD
301: KGKAVTFLLE SLGLNNCEDV LPIYVGDDRT DEDAFKVLRD GPNHGYGILV SAVPKDSNAF YSLRDPSEVM EFLKSLVTWK RSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.