Factsheet for Bra028254.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00477	Canola	plastid	100.0	98.96
CDX99919	Canola	plastid	99.21	97.93
AT5G51460.3	Thale cress	nucleus, plastid	89.53	88.83
Bra022549.1-P	Field mustard	cytosol, plastid	87.17	87.86
Solyc03g083960.2.1	Tomato	plastid	64.14	66.76
PGSC0003DMT400035990	Potato	peroxisome, plastid	66.49	66.15
VIT_16s0022g00660.t01	Wine grape	plastid	66.49	65.97
KRH23805	Soybean	cytosol	66.49	65.3
KRH39976	Soybean	peroxisome	66.49	65.3
HORVU2Hr1G075440.2	Barley	cytosol	21.47	62.6
KRH62612	Soybean	cytosol	62.04	62.04
HORVU4Hr1G036870.1	Barley	mitochondrion	34.29	61.5
Bra013628.1-P	Field mustard	cytosol	51.57	61.37
KRH56343	Soybean	cytosol	62.3	60.71
Bra019370.1-P	Field mustard	nucleus	55.76	58.84
HORVU2Hr1G104360.2	Barley	cytosol, peroxisome, plastid	45.03	58.11
TraesCS1A01G210400.1	Wheat	plastid	57.59	57.74
TraesCS1D01G213700.1	Wheat	plastid	57.33	57.48
EER91963	Sorghum	cytosol	57.33	57.33
Os10t0553300-01	Rice	cytosol, nucleus, peroxisome	57.07	57.07
Zm00001d047110_P001	Maize	cytosol	56.28	56.43
HORVU1Hr1G053770.2	Barley	plastid	56.28	54.85
Bra010658.1-P	Field mustard	cytosol	47.12	52.17
Bra011835.1-P	Field mustard	cytosol	45.29	50.14
TraesCS1B01G224300.2	Wheat	golgi, vacuole	57.33	50.0
Bra008344.1-P	Field mustard	plastid	48.69	49.34
Bra030256.1-P	Field mustard	cytosol	43.19	48.82
Bra015631.1-P	Field mustard	plastid	48.17	48.68
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	34.82	47.5
Bra033634.1-P	Field mustard	cytosol	45.55	46.9
Bra024359.1-P	Field mustard	plastid	40.58	46.13
Bra009057.1-P	Field mustard	plastid	43.72	44.89
Bra031879.1-P	Field mustard	plastid	43.72	44.06
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	23.04	39.29
Bra034400.1-P	Field mustard	plastid	23.82	35.0

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	EnsemblPlantsGene:Bra028254	EnsemblPlants:Bra028254.1	EnsemblPlants:Bra028254.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	UniProt:M4EHI9	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF6
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002543D7B	:

Description

AT5G51460 (E=2e-193) ATTPPA | ATTPPA; trehalose-phosphatase

Coordinates

chrA01:-:19261094..19263058

Molecular Weight (calculated)

42562.9 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.244

Length

382 amino acids

Sequence
(BLAST)

001: MDIKSGHSSP VMTDSPQISN SRLTVRQSRL PPYSSATAVS QNNNLLLTVP RKKTGIIDDV KANAWLDAMI ASSPTPAIVD KDNISSSDAT TDMTYREWTV
101: KYPSALTTFE KIMSVAKGKR IALFLDYDGT LSPIVEEPDA AYMSSDMRTA VQNVAKYFPT AIISGRSRDK VYEFVGLSEL YYAGSHGMDI MSPAGESLNH
201: KHLSRTVSIN EQGKDVNLFQ TASEFLPMID KVLCSLVEST KDIKGVKVED NRFCISVHYR NNWTLVAQCV DDVIRTYPKL RLTYGRKVLE IRPVIDWDKG
301: KAVTFLLESL GLNNCEDVLP IYVGDDRTDE DAFKVLRDGP NHGYGVLVSA MPKVSNAFYS LRDPSEVMEF LKALVTWKRS LG

Best Arabidopsis Sequence Match ( AT5G51460.4 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMLK
101: YPSALTSFEK IMSFAKGKRI ALFLDYDGTL SPIVEEPDCA YMSSAMRSAV QNVAKYFPTA IISGRSRDKV YEFVNLSELY YAGSHGMDIM SPAGESLNHE
201: HSRTVSVYEQ GKDVNLFQPA SEFLPMIDKV LCSLIESTKD IKGVKVEDNK FCISVHYRNV EEKNWTLVAQ CVDDVIRTYP KLRLTHGRKV LEIRPVIDWD
301: KGKAVTFLLE SLGLNNCEDV LPIYVGDDRT DEDAFKVLRD GPNHGYGILV SAVPKDSNAF YSLRDPSEVM EFLKSLVTWK RSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.