Factsheet for Solyc03g083960.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
peroxisome 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035990	Potato	peroxisome, plastid	97.82	93.49
VIT_16s0022g00660.t01	Wine grape	plastid	79.56	75.84
KRH39976	Soybean	peroxisome	77.93	73.52
KRH23805	Soybean	cytosol	77.66	73.26
KRH62612	Soybean	cytosol	72.21	69.37
CDY66417	Canola	plastid	70.03	67.81
KRH56343	Soybean	cytosol	72.21	67.6
AT5G51460.3	Thale cress	nucleus, plastid	70.84	67.53
HORVU4Hr1G036870.1	Barley	mitochondrion	38.69	66.67
CDY56658	Canola	plastid	68.66	66.49
Solyc06g060600.1.1	Tomato	cytosol	57.49	66.35
Solyc08g079060.2.1	Tomato	plastid	69.75	66.32
Bra022549.1-P	Field mustard	cytosol, plastid	68.39	66.23
HORVU2Hr1G075440.2	Barley	cytosol	23.43	65.65
CDY00477	Canola	plastid	67.57	64.25
Bra028254.1-P	Field mustard	plastid	66.76	64.14
CDX99919	Canola	plastid	67.3	63.82
HORVU2Hr1G104360.2	Barley	cytosol, peroxisome, plastid	51.23	63.51
TraesCS1A01G210400.1	Wheat	plastid	63.76	61.42
EER91963	Sorghum	cytosol	63.76	61.26
TraesCS1D01G213700.1	Wheat	plastid	63.49	61.15
Zm00001d047110_P001	Maize	cytosol	62.94	60.63
Os10t0553300-01	Rice	cytosol, nucleus, peroxisome	62.94	60.47
HORVU1Hr1G053770.2	Barley	plastid	63.49	59.44
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	49.05	56.78
Solyc05g051880.2.1	Tomato	plastid	42.78	56.07
Solyc04g072920.2.1	Tomato	extracellular	53.41	53.7
TraesCS1B01G224300.2	Wheat	golgi, vacuole	62.94	52.74
Solyc03g007290.2.1	Tomato	cytosol, mitochondrion, nucleus	44.41	48.51
Solyc04g082550.1.1	Tomato	cytosol	38.15	47.78
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	23.98	39.29

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
UniProt:K4BIH1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF6	SUPFAM:SSF56784	EnsemblPlantsGene:Solyc03g083960.2
EnsemblPlants:Solyc03g083960.2.1	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002768ED9	:

Description

Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:K4BIH1]

Coordinates

chr3:-:53896143..53898914

Molecular Weight (calculated)

41024.8 Da

IEP (calculated)

6.886

GRAVY (calculated)

-0.351

Length

367 amino acids

Sequence
(BLAST)

001: MDLKSNTSPV VTDPAPLTPS RLGIHSALMP YSPALPTFSP TLFLTIPRKK PGILDDVRSN TWLVDAMKSS SPTHRKKSKD STAELASNEN DLAYRIWMLK
101: YPSALSSFEQ ITNYAKGKRL ALFLDYDGTL SPIVDDPDRA FMSSAMRGAV RNVAKYFPTA IISGRSRDKV HDFVGLSELY YAGSHGMDIM SPVRAISDDY
201: SCIRSTDKQG KEVNLFQPAS EFLPMIEEVL RSLVELTKDI SGAKVENNKF CVSVHYRNVD EKSWSTIAES VDDLLKHYPR LRLTHGRKVL EVRPVLNWDK
301: GKAVEFLLES LGLNNCDDVL PIYIGDDRTD EDAFKVLREG NKGYGILVSS APKESNAFYS LRDPSEV

Best Arabidopsis Sequence Match ( AT5G51460.4 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMLK
101: YPSALTSFEK IMSFAKGKRI ALFLDYDGTL SPIVEEPDCA YMSSAMRSAV QNVAKYFPTA IISGRSRDKV YEFVNLSELY YAGSHGMDIM SPAGESLNHE
201: HSRTVSVYEQ GKDVNLFQPA SEFLPMIDKV LCSLIESTKD IKGVKVEDNK FCISVHYRNV EEKNWTLVAQ CVDDVIRTYP KLRLTHGRKV LEIRPVIDWD
301: KGKAVTFLLE SLGLNNCEDV LPIYVGDDRT DEDAFKVLRD GPNHGYGILV SAVPKDSNAF YSLRDPSEVM EFLKSLVTWK RSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.