Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU2Hr1G075440.2 | Barley | cytosol | 42.57 | 96.18 |
HORVU4Hr1G036870.1 | Barley | mitochondrion | 65.88 | 91.55 |
TraesCS1D01G213700.1 | Wheat | plastid | 87.5 | 67.98 |
TraesCS1A01G210400.1 | Wheat | plastid | 87.16 | 67.72 |
HORVU1Hr1G053770.2 | Barley | plastid | 87.16 | 65.82 |
Os10t0553300-01 | Rice | cytosol, nucleus, peroxisome | 80.74 | 62.57 |
Zm00001d047110_P001 | Maize | cytosol | 76.35 | 59.32 |
TraesCS1B01G224300.2 | Wheat | golgi, vacuole | 86.82 | 58.68 |
EER91963 | Sorghum | cytosol | 75.68 | 58.64 |
Solyc03g083960.2.1 | Tomato | plastid | 63.51 | 51.23 |
VIT_16s0022g00660.t01 | Wine grape | plastid | 65.54 | 50.39 |
PGSC0003DMT400035990 | Potato | peroxisome, plastid | 64.19 | 49.48 |
KRH62612 | Soybean | cytosol | 62.84 | 48.69 |
KRH39976 | Soybean | peroxisome | 63.51 | 48.33 |
Bra022549.1-P | Field mustard | cytosol, plastid | 61.82 | 48.28 |
CDY56658 | Canola | plastid | 61.82 | 48.28 |
CDY66417 | Canola | plastid | 61.82 | 48.28 |
KRH23805 | Soybean | cytosol | 62.84 | 47.81 |
KRH56343 | Soybean | cytosol | 62.84 | 47.45 |
AT5G51460.3 | Thale cress | nucleus, plastid | 61.49 | 47.27 |
HORVU2Hr1G097300.2 | Barley | plastid | 57.43 | 46.32 |
HORVU6Hr1G063370.1 | Barley | plastid | 57.09 | 45.55 |
HORVU0Hr1G023540.3 | Barley | plastid | 57.09 | 45.55 |
Bra028254.1-P | Field mustard | plastid | 58.11 | 45.03 |
CDY00477 | Canola | plastid | 58.45 | 44.82 |
CDX99919 | Canola | plastid | 58.11 | 44.44 |
HORVU7Hr1G037140.1 | Barley | plastid | 49.66 | 40.61 |
HORVU6Hr1G074960.2 | Barley | cytosol | 50.0 | 39.47 |
HORVU2Hr1G029290.1 | Barley | golgi, mitochondrion, peroxisome, plastid | 51.35 | 37.53 |
HORVU5Hr1G058300.1 | Barley | plastid | 52.36 | 36.3 |
HORVU1Hr1G061580.4 | Barley | plastid | 21.62 | 31.53 |
GSMUA_Achr2P18630_001 | Banana | cytosol, peroxisome, plastid | 22.64 | 29.91 |
HORVU6Hr1G066240.1 | Barley | plastid | 8.45 | 17.24 |
HORVU3Hr1G015310.1 | Barley | extracellular | 1.35 | 1.57 |
Protein Annotations
MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | UniProt:A0A287J9P3 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004805 | GO:GO:0005975 | GO:GO:0005992 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf | InterPro:HAD_sf |
EnsemblPlantsGene:HORVU2Hr1G104360 | EnsemblPlants:HORVU2Hr1G104360.2 | InterPro:IPR023214 | PFAM:PF02358 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF6 |
SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | InterPro:Trehalose_PPase | UniParc:UPI000B471B6C | : |
Description
Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A287J9P3]
Coordinates
chrchr2H:-:703216414..703221934
Molecular Weight (calculated)
33260.7 Da
IEP (calculated)
5.394
GRAVY (calculated)
-0.270
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTLPKMSMT PHSYAISSFE AITELARGKR LALFLDYDGT LSPIVDNPAN AVMSDEMRAA VRHVASLFPT AIISGRSRDK VFDFVKLTEL YYAGSHGMDI
101: MGPIRKFESN GHHVEWSTDS EDKEVNLFQP ASEFLPMIAE VFENLSESIK DIDGARMEDN KFCVSVHYRN VAPHDYETVH QRVTVVLKDY PCLRLTHGRK
201: VLEVRPVIDS NKGKAVEFLL ESLGLSETDD VLPIYVGDDK TDEDAFKVLK ANNHGFGILV SCVPKDNDAF YSLRDPSEVI KFTPKVRQNY PPMPPV
101: MGPIRKFESN GHHVEWSTDS EDKEVNLFQP ASEFLPMIAE VFENLSESIK DIDGARMEDN KFCVSVHYRN VAPHDYETVH QRVTVVLKDY PCLRLTHGRK
201: VLEVRPVIDS NKGKAVEFLL ESLGLSETDD VLPIYVGDDK TDEDAFKVLK ANNHGFGILV SCVPKDNDAF YSLRDPSEVI KFTPKVRQNY PPMPPV
001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMQL
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG
Arabidopsis Description
TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.