CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62612	Soybean	cytosol	89.8	92.15
KRH23805	Soybean	cytosol	78.32	78.92
KRH39976	Soybean	peroxisome	77.55	78.15
Solyc03g083960.2.1	Tomato	plastid	67.6	72.21
PGSC0003DMT400035990	Potato	peroxisome, plastid	70.41	71.88
VIT_16s0022g00660.t01	Wine grape	plastid	70.15	71.43
HORVU2Hr1G075440.2	Barley	cytosol	22.45	67.18
HORVU4Hr1G036870.1	Barley	mitochondrion	35.97	66.2
CDY66417	Canola	plastid	63.27	65.44
CDY56658	Canola	plastid	62.5	64.64
AT5G51460.3	Thale cress	nucleus, plastid	63.27	64.42
Bra022549.1-P	Field mustard	cytosol, plastid	61.99	64.12
HORVU2Hr1G104360.2	Barley	cytosol, peroxisome, plastid	47.45	62.84
Bra028254.1-P	Field mustard	plastid	60.71	62.3
CDY00477	Canola	plastid	61.22	62.18
CDX99919	Canola	plastid	60.71	61.5
TraesCS1D01G213700.1	Wheat	plastid	59.69	61.42
TraesCS1A01G210400.1	Wheat	plastid	59.44	61.15
KRH04085	Soybean	nucleus, plastid	55.61	60.22
EER91963	Sorghum	cytosol	58.42	59.95
Os10t0553300-01	Rice	cytosol, nucleus, peroxisome	58.42	59.95
Zm00001d047110_P001	Maize	cytosol	57.91	59.58
KRH26019	Soybean	cytosol	14.29	58.95
HORVU1Hr1G053770.2	Barley	plastid	57.65	57.65
KRH75558	Soybean	cytosol, extracellular, peroxisome	9.44	56.06
TraesCS1B01G224300.2	Wheat	golgi, vacuole	59.18	52.97
KRH31279	Soybean	plastid	48.98	52.89
KRH30218	Soybean	plastid	28.83	52.8
KRG97593	Soybean	plastid	48.72	52.33
KRH59366	Soybean	plastid	47.96	51.93
KRH49582	Soybean	mitochondrion	37.76	51.93
KRH43210	Soybean	cytosol, nucleus, peroxisome	48.21	51.64
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	48.72	51.34
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	47.45	50.13
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	48.21	49.87
KRH06490	Soybean	cytosol	39.8	49.84
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	47.96	49.47
KRG98938	Soybean	plastid	17.6	47.59
KRH64499	Soybean	golgi, mitochondrion	43.11	46.05
KRH53451	Soybean	golgi, vacuole	41.84	44.69
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	22.45	39.29
KRH38605	Soybean	cytosol	32.91	24.95

Protein Annotations

EntrezGene:100783008	MapMan:3.3.2	Gene3D:3.40.50.1000	EMBL:ACUP02004111	EnsemblPlantsGene:GLYMA_06G318400	GO:GO:0003674
GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf
InterPro:HAD_sf	UniProt:I1KFR9	InterPro:IPR023214	ProteinID:KRH56342.1	EnsemblPlants:KRH56343	ProteinID:KRH56343
ProteinID:KRH56343.1	ProteinID:KRH56344.1	ProteinID:KRH56345.1	ProteinID:KRH56346.1	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF6	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI00029636C2

Description

hypothetical protein

Coordinates

chr6:+:50701572..50707564

Molecular Weight (calculated)

43432.9 Da

IEP (calculated)

6.115

GRAVY (calculated)

-0.258

Length

392 amino acids

Sequence
(BLAST)

001: MKLCIDLDPM DPKPNLNPVL TDATPLTRSR LGVPSGLSPY SPKGATFPHG TMLAIPRKKT GILDDFRSSG WLDAMKSSSP THNKVSKDLG HGIGSPDAAY
101: STWLLKFPSA LASFDQITNC AKGKRIALFL DYDGTLSPIV DNPDCAFMSD NMRAAVKKVA EYFPTAIISG RSRDKVYEFV GLSELYYAGS HGMDIIGPPR
201: QSNSDNHPDC IRSSDQQVVE VNLFQPAAEF LPMINEVRGL LKECIKDIEG ATVENNKFCV SVHYRNVDEE SWQIVGQHVY DILKEYPRLR VTHGRKVLEV
301: RPVIDWDKGK AVTFLLESLG LNNCDDVLAI YVGDDRTDED AFKVLREVNK GCGILVSPAP KESNAIYSLR DPCEVMEFLT SLAVWKSSIQ AR

Best Arabidopsis Sequence Match ( AT5G51460.1 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMQL
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.