Factsheet for Solyc04g054930.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
peroxisome 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053144	Potato	plastid	98.74	81.09
KRH26019	Soybean	cytosol	23.66	78.95
KRH75558	Soybean	cytosol, extracellular, peroxisome	15.77	75.76
CDY70318	Canola	mitochondrion	55.2	75.11
Solyc05g051880.2.1	Tomato	plastid	64.04	72.5
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	62.46	71.22
KRH31279	Soybean	plastid	77.92	68.04
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	79.5	67.56
KRG97593	Soybean	plastid	77.6	67.4
KRH59366	Soybean	plastid	75.39	66.02
KRH43210	Soybean	cytosol, nucleus, peroxisome	75.39	65.3
Bra010658.1-P	Field mustard	cytosol	70.66	64.93
AT4G39770.1	Thale cress	cytosol	71.29	64.76
Bra011835.1-P	Field mustard	cytosol	70.35	64.64
CDX90361	Canola	cytosol, peroxisome, plastid	70.98	63.56
AT2G22190.1	Thale cress	cytosol, nucleus, peroxisome	70.03	62.71
Bra030256.1-P	Field mustard	cytosol	66.25	62.13
CDY15842	Canola	cytosol	66.25	62.13
CDY63411	Canola	cytosol	65.93	61.65
CDY22393	Canola	cytosol	70.98	60.65
CDY39454	Canola	cytosol	45.74	60.17
Bra033634.1-P	Field mustard	cytosol	70.35	60.11
Solyc04g072920.2.1	Tomato	extracellular	69.09	60.0
AT5G65140.1	Thale cress	plastid	70.03	60.0
AT5G10100.1	Thale cress	plastid	70.66	58.95
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	52.05	58.93
Bra024359.1-P	Field mustard	plastid	62.15	58.63
GSMUA_AchrUn_...	Banana	peroxisome	68.77	58.45
CDY08815	Canola	plastid	66.88	58.4
GSMUA_Achr6P30350_001	Banana	plastid	65.93	58.38
CDY31283	Canola	plastid	68.77	58.13
CDX72676	Canola	mitochondrion	69.72	58.01
Bra031879.1-P	Field mustard	plastid	69.09	57.78
Solyc06g060600.1.1	Tomato	cytosol	57.73	57.55
Bra009057.1-P	Field mustard	plastid	67.51	57.53
GSMUA_Achr10P...	Banana	plastid	66.56	57.03
GSMUA_Achr10P...	Banana	plastid	70.98	55.69
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	62.78	53.07
Solyc04g082550.1.1	Tomato	cytosol	45.74	49.49
Solyc03g083960.2.1	Tomato	plastid	56.78	49.05
CDY14544	Canola	endoplasmic reticulum, plasma membrane	67.82	47.36
Solyc03g007290.2.1	Tomato	cytosol, mitochondrion, nucleus	49.53	46.73
Solyc08g079060.2.1	Tomato	plastid	55.84	45.85
OQU89414	Sorghum	cytosol	21.77	40.83
KRH38605	Soybean	cytosol	50.16	30.75

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
UniProt:K4BSP1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF1	SUPFAM:SSF56784	EnsemblPlantsGene:Solyc04g054930.2
EnsemblPlants:Solyc04g054930.2.1	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002765A4A	SEG:seg

Description

Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:K4BSP1]

Coordinates

chr4:-:53438494..53441329

Molecular Weight (calculated)

36337.8 Da

IEP (calculated)

9.495

GRAVY (calculated)

-0.447

Length

317 amino acids

Sequence
(BLAST)

001: MRASSPTHHK SSPALSDDLN SWMVQHPSAL DMFEQIISAS KGKQIVMFLD YDGTLSPIVE DPDQAFMSDS MRATVRKLAR YFPTAIVSGR CRDKVYSFVR
101: LAELYYAGSH GMDIKGPSKG SKYKKGAQAV LFQPASEFLP MIDEVYKELV DITKSTEGVR VENNKFCASV HFRCVDEKKW GELAQQVRSV LKEYPKLQLT
201: QGRKVLEIRP TIKWDKGKAL EFLLESLGYA NCTDVFPVYI GDDRTDEDAF KVLRERDQGF GILVSKTPKD THASYSLQEP SEVMVFLRRL VEWKKLSLRR
301: QFRIRRQIEE MKASLRN

Best Arabidopsis Sequence Match ( AT5G10100.3 )
(BLAST)

001: MSASQNIVVS ETTMSSIIPN NNNNNNNSSS QKLPPCLISI SKKKLLKNID IINGGGQRIN AWVDSMRASS PTHLKSLPSS ISTQQQLNSW IMQHPSALEK
101: FEQIMEASRG KQIVMFLDYD GTLSPIVDDP DKAFMSSKMR RTVKKLAKCF PTAIVTGRCI DKVYNFVKLA ELYYAGSHGM DIKGPAKGFS RHKRVKQSLL
201: YQPANDYLPM IDEVYRQLLE KTKSTPGAKV ENHKFCASVH FRCVDEKKWS ELVLQVRSVL KKFPTLQLTQ GRKVFEIRPM IEWDKGKALE FLLESLGFGN
301: TNNVFPVYIG DDRTDEDAFK MLRDRGEGFG ILVSKFPKDT DASYSLQDPS EVMDFLRRLV EWKQMQPRM

Arabidopsis Description

TPPITrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A2H1ZE62]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.