Factsheet for Bra010658.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90361	Canola	cytosol, peroxisome, plastid	99.13	96.61
CDY39454	Canola	cytosol	66.96	95.85
Bra011835.1-P	Field mustard	cytosol	89.86	89.86
AT4G39770.1	Thale cress	cytosol	88.41	87.39
Bra033634.1-P	Field mustard	cytosol	89.28	83.02
Bra030256.1-P	Field mustard	cytosol	74.2	75.74
PGSC0003DMT400056161	Potato	cytosol	46.67	75.23
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	64.93	70.66
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	54.78	67.99
Solyc05g051880.2.1	Tomato	plastid	52.75	65.0
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	68.99	63.81
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	50.43	62.14
PGSC0003DMT400053144	Potato	plastid	68.12	60.88
Bra024359.1-P	Field mustard	plastid	58.26	59.82
Bra009057.1-P	Field mustard	plastid	64.06	59.41
Bra031879.1-P	Field mustard	plastid	64.06	58.31
GSMUA_Achr6P30350_001	Banana	plastid	58.26	56.15
GSMUA_AchrUn_...	Banana	peroxisome	60.58	56.03
GSMUA_Achr10P...	Banana	plastid	59.42	55.41
GSMUA_Achr10P...	Banana	plastid	63.77	54.46
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	58.84	54.13
Bra015631.1-P	Field mustard	plastid	58.84	53.7
Bra013628.1-P	Field mustard	cytosol	49.28	52.96
Bra008344.1-P	Field mustard	plastid	57.68	52.79
Bra019370.1-P	Field mustard	nucleus	51.3	48.9
Bra022549.1-P	Field mustard	cytosol, plastid	52.17	47.49
Bra028254.1-P	Field mustard	plastid	52.17	47.12
OQU89414	Sorghum	cytosol	19.13	39.05
Bra034400.1-P	Field mustard	plastid	24.93	33.08

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EnsemblPlantsGene:Bra010658	EnsemblPlants:Bra010658.1	EnsemblPlants:Bra010658.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M4D2F8	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF1	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002546788

Description

AT4G39770 (E=2e-179) | trehalose-6-phosphate phosphatase, putative

Coordinates

chrA08:+:15823735..15826411

Molecular Weight (calculated)

39330.4 Da

IEP (calculated)

7.826

GRAVY (calculated)

-0.429

Length

345 amino acids

Sequence
(BLAST)

001: MVRFVEENTK HMEKETGNIS NTDVTTLTKK VLQDLSINNG GGFVNSWVDS MRACSPTHLK SLMKQSSWLT EHPSALDMFE EILHVSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSKKMRRT VRKLAICFPT AIVSGRCREK VYNFVKLTEL YYAGSHGMDI KGPAQGSKYK EGKSLLCQPA TEFLPMIDEV YQKLVEKTKV
201: TPGANVENNK FCASVHFRRV DEKNWSDLAN QVGSVIKEYP KLRITQGRKV LEIRPIIKWD KGKALEFLLE SLGYANCTDV FPIYIGDDRT DEDAFKILRD
301: KRQGLGILVS KFPKETNASY SLQEPDEVMD FLQRLVEWEQ MRSGA

Best Arabidopsis Sequence Match ( AT4G39770.1 )
(BLAST)

001: MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK SLLKQSSWLT EHPSALDMFE EILHLSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA

Arabidopsis Description

TPPHProbable trehalose-phosphate phosphatase H [Source:UniProtKB/Swiss-Prot;Acc:Q8GWG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.