Factsheet for Bra011835.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G39770.1	Thale cress	cytosol	91.01	89.97
Bra010658.1-P	Field mustard	cytosol	89.86	89.86
Bra033634.1-P	Field mustard	cytosol	91.59	85.18
Bra030256.1-P	Field mustard	cytosol	73.33	74.85
PGSC0003DMT400056161	Potato	cytosol	45.51	73.36
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	64.64	70.35
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	55.07	68.35
Solyc05g051880.2.1	Tomato	plastid	53.04	65.36
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	69.86	64.61
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	49.86	61.43
PGSC0003DMT400053144	Potato	plastid	67.83	60.62
Bra024359.1-P	Field mustard	plastid	57.97	59.52
Bra009057.1-P	Field mustard	plastid	63.77	59.14
Bra031879.1-P	Field mustard	plastid	64.06	58.31
GSMUA_AchrUn_...	Banana	peroxisome	61.74	57.1
GSMUA_Achr6P30350_001	Banana	plastid	59.13	56.98
GSMUA_Achr10P...	Banana	plastid	59.71	55.68
Bra015631.1-P	Field mustard	plastid	60.58	55.29
GSMUA_Achr10P...	Banana	plastid	64.35	54.95
Bra008344.1-P	Field mustard	plastid	59.71	54.64
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	58.84	54.13
Bra013628.1-P	Field mustard	cytosol	47.83	51.4
Bra019370.1-P	Field mustard	nucleus	49.86	47.51
Bra022549.1-P	Field mustard	cytosol, plastid	50.43	45.91
Bra028254.1-P	Field mustard	plastid	50.14	45.29
OQU89414	Sorghum	cytosol	18.55	37.87
Bra034400.1-P	Field mustard	plastid	25.51	33.85

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EnsemblPlantsGene:Bra011835	EnsemblPlants:Bra011835.1	EnsemblPlants:Bra011835.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M4D5S8	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF1	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002546227

Description

AT4G39770 (E=9e-183) | trehalose-6-phosphate phosphatase, putative

Coordinates

chrA01:-:301416..303452

Molecular Weight (calculated)

39462.4 Da

IEP (calculated)

8.342

GRAVY (calculated)

-0.525

Length

345 amino acids

Sequence
(BLAST)

001: MVRFIEENTK HVDKETGNKS NTDVTTATKK VLQDLIINNG GGLINSWVDS MRACSPTHLK SLMKQSSWLK EHPSALEMFE EILHASEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSKQMRRT VRNLANCFPT AIVSGRCREK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE ADKSLLCQPA TEFLPMIDEV YQRLMEKTKS
201: TPGANVENNK FCVSVHFRRV DEKNWSDLAN QVRSVMKDYP KLRLTQGRKV LEIRPIIKWD KGNALEFLLE SLGYANCTNV FPLYIGDDRT DEDAFKILRE
301: RRQGLGILVS KSPKETNASY SLQEPDEVMD FLQRLVKWKQ LRSGA

Best Arabidopsis Sequence Match ( AT4G39770.1 )
(BLAST)

001: MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK SLLKQSSWLT EHPSALDMFE EILHLSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA

Arabidopsis Description

TPPHProbable trehalose-phosphate phosphatase H [Source:UniProtKB/Swiss-Prot;Acc:Q8GWG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.